PTEN: A Novel Diabetes Nephropathy Protective Gene Related to Cellular Senescence

Diabetic nephropathy (DN) is the leading cause of end-stage renal disease (ESRD). The current diagnostic and therapeutic approaches need to be improved. Cellular senescence has been implicated in the pathogenesis of DN, but its precise role remains unclear. This study aimed to identify key pathogenic genes related to cellular senescence in DN and explore their potential as diagnostic biomarkers. Using transcriptomic data from GEO datasets (GSE96804, GSE30122, GSE142025, and GSE104948) and cellular senescence-related genes sourced from the GenAge database, we integrated multiple bioinformatics approaches, including differential expression analysis, weighted gene co-expression network analysis (WGCNA), machine learning and protein-protein interaction (PPI), to identify diagnostic genes. <i>PTEN</i> was identified as a key diagnostic gene. Immune infiltration analysis revealed that <i>PTEN</i> expression is positively correlated with macrophage M2 and dendritic cell resting infiltration and negatively correlated with monocytes and neutrophils. snRNA analysis revealed that <i>PTEN</i> is mainly expressed in mesangial cells. Finally, RT-PCR results revealed that the mRNA expression of <i>PTEN</i> was upregulated in kidneys from db/db <i>mice</i>. Additionally, high-glucose treatment significantly upregulated <i>PTEN</i> expression in cultured <i>human</i> mesangial cells. This study identifies <i>PTEN</i> as a potential diagnostic biomarker for DN which may contribute to early detection and personalized therapeutic strategies.

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Publication Details

Journal
International Journal of Molecular Sciences
Published
2025-03-27
DOI
https://doi.org/10.3390/ijms26073088
Citations
4
Primary Topic
Sirtuins and Resveratrol in Medicine
Type
article
Field-Weighted Citation Impact
4.90

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article

PTEN: A Novel Diabetes Nephropathy Protective Gene Related to Cellular Senescence

Xiaoli Zhang, Xiaojie Wang, Xiaoqing Cao, Kang Li et al.
4 citations
International Journal of Molecular Sciences
Sirtuins and Resveratrol in Medicine
4.90
article

PTEN: A Novel Diabetes Nephropathy Protective Gene Related to Cellular Senescence

Xiaoli Zhang, Xiaojie Wang, Xiaoqing Cao, Kang Li, Huidi Tang
article en
4 citations

Abstract

Diabetic nephropathy (DN) is the leading cause of end-stage renal disease (ESRD). The current diagnostic and therapeutic approaches need to be improved. Cellular senescence has been implicated in the pathogenesis of DN, but its precise role remains unclear. This study aimed to identify key pathogenic genes related to cellular senescence in DN and explore their potential as diagnostic biomarkers. Using transcriptomic data from GEO datasets (GSE96804, GSE30122, GSE142025, and GSE104948) and cellular senescence-related genes sourced from the GenAge database, we integrated multiple bioinformatics approaches, including differential expression analysis, weighted gene co-expression network analysis (WGCNA), machine learning and protein-protein interaction (PPI), to identify diagnostic genes. <i>PTEN</i> was identified as a key diagnostic gene. Immune infiltration analysis revealed that <i>PTEN</i> expression is positively correlated with macrophage M2 and dendritic cell resting infiltration and negatively correlated with monocytes and neutrophils. snRNA analysis revealed that <i>PTEN</i> is mainly expressed in mesangial cells. Finally, RT-PCR results revealed that the mRNA expression of <i>PTEN</i> was upregulated in kidneys from db/db <i>mice</i>. Additionally, high-glucose treatment significantly upregulated <i>PTEN</i> expression in cultured <i>human</i> mesangial cells. This study identifies <i>PTEN</i> as a potential diagnostic biomarker for DN which may contribute to early detection and personalized therapeutic strategies.

International Journal of Molecular SciencesVol. 26(7)
Shandong University (CN), Shanghai Public Health Clinical Center (CN)
National Natural Science Foundation of China, Natural Science Foundation of Shandong Province
Openalex Percentile: Top 6%
Sirtuins and Resveratrol in Medicine
4.90
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