PTEN: A Novel Diabetes Nephropathy Protective Gene Related to Cellular Senescence
Diabetic nephropathy (DN) is the leading cause of end-stage renal disease (ESRD). The current diagnostic and therapeutic approaches need to be improved. Cellular senescence has been implicated in the pathogenesis of DN, but its precise role remains unclear. This study aimed to identify key pathogenic genes related to cellular senescence in DN and explore their potential as diagnostic biomarkers. Using transcriptomic data from GEO datasets (GSE96804, GSE30122, GSE142025, and GSE104948) and cellular senescence-related genes sourced from the GenAge database, we integrated multiple bioinformatics approaches, including differential expression analysis, weighted gene co-expression network analysis (WGCNA), machine learning and protein-protein interaction (PPI), to identify diagnostic genes. <i>PTEN</i> was identified as a key diagnostic gene. Immune infiltration analysis revealed that <i>PTEN</i> expression is positively correlated with macrophage M2 and dendritic cell resting infiltration and negatively correlated with monocytes and neutrophils. snRNA analysis revealed that <i>PTEN</i> is mainly expressed in mesangial cells. Finally, RT-PCR results revealed that the mRNA expression of <i>PTEN</i> was upregulated in kidneys from db/db <i>mice</i>. Additionally, high-glucose treatment significantly upregulated <i>PTEN</i> expression in cultured <i>human</i> mesangial cells. This study identifies <i>PTEN</i> as a potential diagnostic biomarker for DN which may contribute to early detection and personalized therapeutic strategies.
Authors
- Xiaoli Zhang (ORCID: https://orcid.org/0000-0002-5092-4565)
- Xiaojie Wang (ORCID: https://orcid.org/0000-0003-4817-5830)
- Xiaoqing Cao
- Kang Li (ORCID: https://orcid.org/0000-0002-2213-5489)
- Huidi Tang
Institutions
- Shandong University (CN)
- Shanghai Public Health Clinical Center (CN)
Publication Details
- Journal
- International Journal of Molecular Sciences
- Published
- 2025-03-27
- DOI
- https://doi.org/10.3390/ijms26073088
- Citations
- 4
- Primary Topic
- Sirtuins and Resveratrol in Medicine
- Type
- article
- Field-Weighted Citation Impact
- 4.90
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Shandong Province