Development of a k-Nearest Neighbors Model for the Prediction of Late-Onset Alzheimer’s Risk by Combining Polygenic Risk Scores and Phenotypic Variables

The application of a mathematical model that combines genetic and clinical covariates showed a good prediction of the AD/LOAD risk, with the higher weight being the polygenic genetic risk, <i>APOE</i> haplotype, and age. Compared to previous studies, our model integrates and correlates genetic prediction together with phenotypic information by fine-tuning the parameters of the model in order to achieve the best performance. This algorithm can be used in the general population and does not require the manifestation of any symptoms for its effective application. Thus, we present here an advanced model for risk prediction of LOAD.

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Publication Details

Journal
Genes
Published
2025-03-26
DOI
https://doi.org/10.3390/genes16040377
Primary Topic
Bioinformatics and Genomic Networks
Type
article
Field-Weighted Citation Impact
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article

Development of a k-Nearest Neighbors Model for the Prediction of Late-Onset Alzheimer’s Risk by Combining Polygenic Risk Scores and Phenotypic Variables

Rosana Ferrero, Marta Alonso-Bernáldez, Jair Tenorio, A. S. Torres González et al.
Genes
Bioinformatics and Genomic Networks
article

Development of a k-Nearest Neighbors Model for the Prediction of Late-Onset Alzheimer’s Risk by Combining Polygenic Risk Scores and Phenotypic Variables

Rosana Ferrero, Marta Alonso-Bernáldez, Jair Tenorio, A. S. Torres González, Santiago Fernando Suárez López, Jorge Blom-Dahl, Guillermo Pérez-Solero
article en

Abstract

The application of a mathematical model that combines genetic and clinical covariates showed a good prediction of the AD/LOAD risk, with the higher weight being the polygenic genetic risk, <i>APOE</i> haplotype, and age. Compared to previous studies, our model integrates and correlates genetic prediction together with phenotypic information by fine-tuning the parameters of the model in order to achieve the best performance. This algorithm can be used in the general population and does not require the manifestation of any symptoms for its effective application. Thus, we present here an advanced model for risk prediction of LOAD.

GenesVol. 16(4)
Pontificia Universidad Católica de Chile (CL), Instituto de Salud Carlos III (ES), Center of Applied Ecology & Sustainability (CL), Centre for Biomedical Network Research on Rare Diseases (ES)
Openalex Percentile: Top 95%
Bioinformatics and Genomic Networks
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