MolHyper: Hypergraph-enhanced Graph Network for Accurate Molecular Property Prediction

Accurate prediction of molecular properties plays a crucial role in drug discovery, materials science, and elucidating chemical reaction mechanisms. Recently, the latest advances in deep learning have significantly outperformed traditional methods in this task. However, existing graph-based methods still face challenges in handling complex molecular structures, such as distinguishing molecules with similar structures but different functional groups. To address these issues, we propose a graph network with hypergraph properties, denoted as MolHyper, which mitigates the impact of noise and enhances prediction accuracy by capturing internode message passing and higher-order correlations of motifs. Experimental results on eight benchmark datasets from MoleculeNet demonstrate the effectiveness of this approach.

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Published
2024-09-13
DOI
https://doi.org/10.1109/itme63426.2024.00135
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
0.00

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article

MolHyper: Hypergraph-enhanced Graph Network for Accurate Molecular Property Prediction

Qingquan Qiu, Sheng Lian, Ya‐Wen Lin, Qinghe Yuan
Computational Drug Discovery Methods
article

MolHyper: Hypergraph-enhanced Graph Network for Accurate Molecular Property Prediction

Qingquan Qiu, Sheng Lian, Ya‐Wen Lin, Qinghe Yuan
article en

Abstract

Accurate prediction of molecular properties plays a crucial role in drug discovery, materials science, and elucidating chemical reaction mechanisms. Recently, the latest advances in deep learning have significantly outperformed traditional methods in this task. However, existing graph-based methods still face challenges in handling complex molecular structures, such as distinguishing molecules with similar structures but different functional groups. To address these issues, we propose a graph network with hypergraph properties, denoted as MolHyper, which mitigates the impact of noise and enhances prediction accuracy by capturing internode message passing and higher-order correlations of motifs. Experimental results on eight benchmark datasets from MoleculeNet demonstrate the effectiveness of this approach.

Fuzhou University (CN)
Natural Science Foundation of Fujian Province
Openalex Percentile: Top 68%
Computational Drug Discovery Methods
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