Electrostatic regulation of liquid-liquid phase separation of DNA-polypeptide system

Liquid-liquid phase separation (LLPS) of proteins and nucleic acids play an important role in the formation of membraneless intracellular organelles and is related to some diseases due to abnormal protein aggregation.In the present study, we focus on the mechanism and regulation of LLPS of polylysine (PLL) and DNA solution.We found that the dominant interaction in PLL-DNA system is electronic force between them.Then we regulated its LLPS by adding ethanol and zwitterionic 6-Aminocaproic acid (6-A) which enhance and suppress electrostatic interaction between the macroions charged oppositely.The result showed when a fixed DNA concentration was kept in solution, LLPS occurred at a lower critical value of PLL concentration and disappeared at a higher critical concentration.The addition of ethanol shifted the range of LLPS upward, while 6-A shifted it downward.Specifically, for a fixed DNA concentration of 1 g/l, the critical PLL concentrations for LLPS were 0.4 g/l and 2 g/l, respectively.Upon addition of 20% ethanol, the critical PLL concentrations increased to 1 g/l and 4.5 g/l, respectively.On the other hand, the addition of 700 mM 6-A decreased the critical PLL concentrations to 0.35 g/l and 1 g/l, respectively.The results demonstrate that the adjustment of electrostatic interaction between DNA and counterions can effectively influence the LLPS of DNA.

Authors

Institutions

Publication Details

Journal
Journal of STEM
Published
2024-12-02
DOI
https://doi.org/10.63460/nmbo2404
Primary Topic
DNA and Nucleic Acid Chemistry
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Electrostatic regulation of liquid-liquid phase separation of DNA-polypeptide system

Guangcan Yang, Yanwei Wang, Yi Shi, Jianqiu Lu et al.
Journal of STEM
DNA and Nucleic Acid Chemistry
article

Electrostatic regulation of liquid-liquid phase separation of DNA-polypeptide system

Guangcan Yang, Yanwei Wang, Yi Shi, Jianqiu Lu, Xiaodong He, Yu Zheng, Zhirong Liu
article en

Abstract

Liquid-liquid phase separation (LLPS) of proteins and nucleic acids play an important role in the formation of membraneless intracellular organelles and is related to some diseases due to abnormal protein aggregation.In the present study, we focus on the mechanism and regulation of LLPS of polylysine (PLL) and DNA solution.We found that the dominant interaction in PLL-DNA system is electronic force between them.Then we regulated its LLPS by adding ethanol and zwitterionic 6-Aminocaproic acid (6-A) which enhance and suppress electrostatic interaction between the macroions charged oppositely.The result showed when a fixed DNA concentration was kept in solution, LLPS occurred at a lower critical value of PLL concentration and disappeared at a higher critical concentration.The addition of ethanol shifted the range of LLPS upward, while 6-A shifted it downward.Specifically, for a fixed DNA concentration of 1 g/l, the critical PLL concentrations for LLPS were 0.4 g/l and 2 g/l, respectively.Upon addition of 20% ethanol, the critical PLL concentrations increased to 1 g/l and 4.5 g/l, respectively.On the other hand, the addition of 700 mM 6-A decreased the critical PLL concentrations to 0.35 g/l and 1 g/l, respectively.The results demonstrate that the adjustment of electrostatic interaction between DNA and counterions can effectively influence the LLPS of DNA.

Journal of STEM
Wenzhou University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Zhejiang Province
Openalex Percentile: Top 77%
DNA and Nucleic Acid Chemistry
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Electrostatic regulation of liquid-liquid phase separation of DNA-polypeptide system — Guangcan Yang, Yanwei Wang, et al. · Journal of STEM (2024) | TGRS Research Map | TGRS