Determination of rice (Oryza sativa L.) drought stress levels based on chlorophyll a fluorescence through independent component analysis

Sensing rice drought stress is crucial for agriculture, and chlorophyll <i>a</i> fluorescence (ChlF) is often used. However, existing techniques usually rely on defined feature points on the OJIP induction curve, which ignores the rich physiological information in the entire curve. Independent Component Analysis (ICA) can effectively preserve independent features, making it suitable for capturing drought-induced physiological changes. This study applies ICA and Support Vector Machine (SVM) to classify drought levels using the entire OJIP curve. The results show that the 20-dimensional ChlF features obtained by ICA provide superior classification performance, with <i>Accuracy</i>, <i>Precision</i>, <i>Recall</i>, <i>F1</i>-<i>score</i>, and <i>Kappa</i> coefficient improving by 18.15%, 0.18, 0.17, 0.17, and 0.22, respectively, compared to the entire curve. This work provides a rice drought stress levels determination method and highlights the importance of applying dimension reduction methods for ChlF analysis. This work is expected to enhance stress detection using ChlF.

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Publication Details

Journal
Photosynthetica
Published
2025-03-27
DOI
https://doi.org/10.32615/ps.2025.009
Citations
5
Primary Topic
Rice Cultivation and Yield Improvement
Type
article
Field-Weighted Citation Impact
8.75
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article

Determination of rice (Oryza sativa L.) drought stress levels based on chlorophyll a fluorescence through independent component analysis

Suleyman I. Allakhverdiev, H. Y. Tang, Ya Guo, Qian Xia et al.
5 citations
Photosynthetica
Rice Cultivation and Yield Improvement
8.75
article

Determination of rice (Oryza sativa L.) drought stress levels based on chlorophyll a fluorescence through independent component analysis

Suleyman I. Allakhverdiev, H. Y. Tang, Ya Guo, Qian Xia, Junyan Tan
article en
5 citations

Abstract

Sensing rice drought stress is crucial for agriculture, and chlorophyll <i>a</i> fluorescence (ChlF) is often used. However, existing techniques usually rely on defined feature points on the OJIP induction curve, which ignores the rich physiological information in the entire curve. Independent Component Analysis (ICA) can effectively preserve independent features, making it suitable for capturing drought-induced physiological changes. This study applies ICA and Support Vector Machine (SVM) to classify drought levels using the entire OJIP curve. The results show that the 20-dimensional ChlF features obtained by ICA provide superior classification performance, with <i>Accuracy</i>, <i>Precision</i>, <i>Recall</i>, <i>F1</i>-<i>score</i>, and <i>Kappa</i> coefficient improving by 18.15%, 0.18, 0.17, 0.17, and 0.22, respectively, compared to the entire curve. This work provides a rice drought stress levels determination method and highlights the importance of applying dimension reduction methods for ChlF analysis. This work is expected to enhance stress detection using ChlF.

PhotosyntheticaVol. 63(1)
Jiangnan University (CN), Suzhou University of Technology (CN), Timiryazev Institute of Plant Physiology (RU), University of Missouri (US)
Zero hunger
Openalex Percentile: Top 3%
Rice Cultivation and Yield Improvement
8.75
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