MORPSO_ECD+ELM: A Unified Framework for Gene Selection and Cancer Classification

Gene selection and cancer classification are inherently multi-objective tasks that require balancing competing objectives, such as maximizing classification accuracy while minimizing irrelevant or redundant genes. Existing methods often optimize a single objective or treat gene selection and classification independently, limiting their overall effectiveness. This study proposes a unified framework, MORPSO_ECD+ELM, which formulates gene selection and classification as a multimodal multi-objective optimization problem (MMOP) to optimize both objectives simultaneously. The framework introduces two key innovations: (1) an enhanced crowding distance (ECD) metric to improve diversity preservation and (2) an advanced multi-objective particle swarm optimization variant (MORPSO_ECD) that incorporates ECD and ring topography to effectively explore the MMOP solution space. Integrated with the Extreme Learning Machine (ELM), this framework achieves robust and efficient cancer classification. Extensive experimental validations demonstrate that the proposed approach achieves high classification accuracy while identifying biologically meaningful gene subsets, providing a powerful solution to bridge the gap between gene selection and cancer classification.

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Publication Details

Journal
IEEE Journal of Biomedical and Health Informatics
Published
2025-03-26
DOI
https://doi.org/10.1109/jbhi.2025.3526825
Citations
4
Primary Topic
Gene expression and cancer classification
Type
article
Field-Weighted Citation Impact
3.22

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article

MORPSO_ECD+ELM: A Unified Framework for Gene Selection and Cancer Classification

Muhammad Sohail, Qing-Hua Ling, Sumet Mehta, Arfan Ali Nagra et al.
4 citations
IEEE Journal of Biomedical and Health Informatics
Gene expression and cancer classification
3.22
article

MORPSO_ECD+ELM: A Unified Framework for Gene Selection and Cancer Classification

Muhammad Sohail, Qing-Hua Ling, Sumet Mehta, Arfan Ali Nagra, Fei Han
article en
4 citations

Abstract

Gene selection and cancer classification are inherently multi-objective tasks that require balancing competing objectives, such as maximizing classification accuracy while minimizing irrelevant or redundant genes. Existing methods often optimize a single objective or treat gene selection and classification independently, limiting their overall effectiveness. This study proposes a unified framework, MORPSO_ECD+ELM, which formulates gene selection and classification as a multimodal multi-objective optimization problem (MMOP) to optimize both objectives simultaneously. The framework introduces two key innovations: (1) an enhanced crowding distance (ECD) metric to improve diversity preservation and (2) an advanced multi-objective particle swarm optimization variant (MORPSO_ECD) that incorporates ECD and ring topography to effectively explore the MMOP solution space. Integrated with the Extreme Learning Machine (ELM), this framework achieves robust and efficient cancer classification. Extensive experimental validations demonstrate that the proposed approach achieves high classification accuracy while identifying biologically meaningful gene subsets, providing a powerful solution to bridge the gap between gene selection and cancer classification.

IEEE Journal of Biomedical and Health InformaticsVol. 29(6)
Jiangsu University (CN), Jiangsu University of Science and Technology (CN), Lahore Garrison University (PK), National University of Sciences and Technology (PK)
National Natural Science Foundation of China
Zero hunger
Openalex Percentile: Top 9%
Gene expression and cancer classification
3.22
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MORPSO_ECD+ELM: A Unified Framework for Gene Selection and Cancer Classification — Muhammad Sohail, Qing-Hua Ling, et al. · IEEE Journal of Biomedical and Health Informatics (2025) | TGRS Research Map | TGRS