Solvation free energies from neural thermodynamic integration

We present a method for computing free-energy differences using thermodynamic integration with a neural network potential that interpolates between two target Hamiltonians. The interpolation is defined at the sample distribution level, and the neural network potential is optimized to match the corresponding equilibrium potential at every intermediate time step. Once the interpolating potentials and samples are well-aligned, the free-energy difference can be estimated using (neural) thermodynamic integration. To target molecular systems, we simultaneously couple Lennard-Jones and electrostatic interactions and model the rigid-body rotation of molecules. We report accurate results for several benchmark systems: a Lennard-Jones particle in a Lennard-Jones fluid, as well as the insertion of both water and methane solutes in a water solvent at atomistic resolution using a simple three-body neural-network potential.

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Publication Details

Journal
The Journal of Chemical Physics
Published
2025-03-25
DOI
https://doi.org/10.1063/5.0251736
Citations
3
Primary Topic
Protein Structure and Dynamics
Type
article
Field-Weighted Citation Impact
2.42

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article

Solvation free energies from neural thermodynamic integration

Tristan Bereau, Bálint Máté, François Fleuret
3 citations
The Journal of Chemical Physics
Protein Structure and Dynamics
2.42
article

Solvation free energies from neural thermodynamic integration

Tristan Bereau, Bálint Máté, François Fleuret
article en
3 citations

Abstract

We present a method for computing free-energy differences using thermodynamic integration with a neural network potential that interpolates between two target Hamiltonians. The interpolation is defined at the sample distribution level, and the neural network potential is optimized to match the corresponding equilibrium potential at every intermediate time step. Once the interpolating potentials and samples are well-aligned, the free-energy difference can be estimated using (neural) thermodynamic integration. To target molecular systems, we simultaneously couple Lennard-Jones and electrostatic interactions and model the rigid-body rotation of molecules. We report accurate results for several benchmark systems: a Lennard-Jones particle in a Lennard-Jones fluid, as well as the insertion of both water and methane solutes in a water solvent at atomistic resolution using a simple three-body neural-network potential.

The Journal of Chemical PhysicsVol. 162(12)
University of Geneva (CH), Heidelberg University (DE), Art Institute of Portland (US), Instituto de Física Teórica (ES), Heidelberg Institute for Theoretical Studies (DE), Heidelberg University (US)
Deutsche Forschungsgemeinschaft, Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Affordable and clean energy
Openalex Percentile: Top 12%
Protein Structure and Dynamics
2.42
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Solvation free energies from neural thermodynamic integration — Tristan Bereau, Bálint Máté, et al. · The Journal of Chemical Physics (2025) | TGRS Research Map | TGRS