Insights into the Therapeutic Targets and Molecular Mechanisms of Eruca sativa Against Colorectal Cancer: An Integrated Approach Combining Network Pharmacology, Molecular Docking and Dynamics Simulation

<b>Background/Objectives:</b> This study presents a novel and comprehensive investigation into the anti-colorectal cancer (CRC) effects and underlying mechanisms of <i>Eruca sativa</i> (<i>E. sativa</i>) using an integrated approach combining network pharmacology, molecular docking and molecular dynamics simulation. <b>Methods:</b> Using an integrated approach, six bioactive compounds and 40 potential targets were identified. A compound-target network was constructed, and enrichment analysis was performed to explore the key pathways influenced by <i>E. sativa</i>. Molecular docking analysis was used to evaluate the binding interactions between the identified compounds and key CRC-related targets (AKT1, PGR, MMP9, and PTGS2). Furthermore, molecular dynamics simulation was utilized to confirm the stability and reliability of these interactions. <b>Results:</b> The study found that <i>E. sativa</i> exhibits strong anticancer potential, particularly through major compounds such as β-ionone, 1-octanol, isorhamnetin, 2-hexenal, propionic acid, and quercetin. Molecular docking revealed favorable binding interactions between these compounds and key CRC targets, with quercetin and isorhamnetin showing the highest binding affinities. Additionally, molecular dynamics simulations validated the stability of these interactions, reinforcing their therapeutic relevance. <b>Conclusions:</b> This study provides valuable insights into the pharmacological mechanisms of <i>E. sativa</i> against CRC, highlighting its potential as a natural anticancer agent. These findings pave the way for future clinical studies to validate the efficacy and safety of E. sativa and its bioactive compounds, potentially contributing to the development of novel, plant-based therapeutic strategies for CRC treatment.

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Journal
Pharmaceuticals
Published
2025-03-24
DOI
https://doi.org/10.3390/ph18040453
Citations
4
Primary Topic
Genomics, phytochemicals, and oxidative stress
Type
article
Field-Weighted Citation Impact
3.22
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article

Insights into the Therapeutic Targets and Molecular Mechanisms of Eruca sativa Against Colorectal Cancer: An Integrated Approach Combining Network Pharmacology, Molecular Docking and Dynamics Simulation

Faizul Azam, Humera Banu, Syed Amir Ashraf, Md Faruque Ahmad et al.
4 citations
Pharmaceuticals
Genomics, phytochemicals, and oxidative stress
3.22
article

Insights into the Therapeutic Targets and Molecular Mechanisms of Eruca sativa Against Colorectal Cancer: An Integrated Approach Combining Network Pharmacology, Molecular Docking and Dynamics Simulation

Faizul Azam, Humera Banu, Syed Amir Ashraf, Md Faruque Ahmad, Syed Shahanawaz, Mohd Adnan, Mitesh B. Patel, Naif Alarifi, Eyad Al-Shammari
article en
4 citations

Abstract

<b>Background/Objectives:</b> This study presents a novel and comprehensive investigation into the anti-colorectal cancer (CRC) effects and underlying mechanisms of <i>Eruca sativa</i> (<i>E. sativa</i>) using an integrated approach combining network pharmacology, molecular docking and molecular dynamics simulation. <b>Methods:</b> Using an integrated approach, six bioactive compounds and 40 potential targets were identified. A compound-target network was constructed, and enrichment analysis was performed to explore the key pathways influenced by <i>E. sativa</i>. Molecular docking analysis was used to evaluate the binding interactions between the identified compounds and key CRC-related targets (AKT1, PGR, MMP9, and PTGS2). Furthermore, molecular dynamics simulation was utilized to confirm the stability and reliability of these interactions. <b>Results:</b> The study found that <i>E. sativa</i> exhibits strong anticancer potential, particularly through major compounds such as β-ionone, 1-octanol, isorhamnetin, 2-hexenal, propionic acid, and quercetin. Molecular docking revealed favorable binding interactions between these compounds and key CRC targets, with quercetin and isorhamnetin showing the highest binding affinities. Additionally, molecular dynamics simulations validated the stability of these interactions, reinforcing their therapeutic relevance. <b>Conclusions:</b> This study provides valuable insights into the pharmacological mechanisms of <i>E. sativa</i> against CRC, highlighting its potential as a natural anticancer agent. These findings pave the way for future clinical studies to validate the efficacy and safety of E. sativa and its bioactive compounds, potentially contributing to the development of novel, plant-based therapeutic strategies for CRC treatment.

PharmaceuticalsVol. 18(4)
Riyadh Armed Forces Hospital (SA), Qassim University (SA), University of Ha'il (SA), Jazan University (SA), Parul University (IN)
Good health and well-being
Openalex Percentile: Top 9%
Genomics, phytochemicals, and oxidative stress
3.22
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