AMPK Knockout Impairs the Formation of Three-Dimensional Spheroids

AMP-activated protein kinase (AMPK) is an important regulator of cellular energy homeostasis, and AMPK contributes to cell growth, apoptosis, and autophagy. Although most cell studies have been performed using two-dimensional (2D) cell culture, recent studies have demonstrated that the three-dimensional (3D) spheroid technique is helpful in various cell research fields, such as tumor biology, due to its resemblance to the 3D tissue structure. However, the role of AMPK in 3D spheroid formation has not been characterized clearly. This study used the AMPK knockout cell line to examine the role of AMPK in 3D spheroid formation and is the first report describing the generation of 3D spheroids using AMPK knockout cells. While control cells produced round spheroids with a similar length-to-width ratio, AMPK knockout produced an oval shape with a more significant length-to-width ratio. We demonstrate that AMPK knockout spheroids contain significantly more prominent lysosomes in each cell, indicating that autophagic flux is impaired in 3D spheroids. Finally, flow cytometry analysis showed that AMPK knockout spheroids contain more apoptotic cells than control cells. These results indicate that AMPK is required for efficient 3D spheroid formation.

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Journal
Life
Published
2025-03-22
DOI
https://doi.org/10.3390/life15040525
Primary Topic
Autophagy in Disease and Therapy
Type
article
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article

AMPK Knockout Impairs the Formation of Three-Dimensional Spheroids

Junsoo Park, Jong Kwang Hong, Siyun Lee, Inkyu Yoo et al.
Life
Autophagy in Disease and Therapy
article

AMPK Knockout Impairs the Formation of Three-Dimensional Spheroids

Junsoo Park, Jong Kwang Hong, Siyun Lee, Inkyu Yoo, Yea–In Park, Chang Youn Lee, Yang Hoon Huh, Rackhyun Park, Hakhyun Ka
article en

Abstract

AMP-activated protein kinase (AMPK) is an important regulator of cellular energy homeostasis, and AMPK contributes to cell growth, apoptosis, and autophagy. Although most cell studies have been performed using two-dimensional (2D) cell culture, recent studies have demonstrated that the three-dimensional (3D) spheroid technique is helpful in various cell research fields, such as tumor biology, due to its resemblance to the 3D tissue structure. However, the role of AMPK in 3D spheroid formation has not been characterized clearly. This study used the AMPK knockout cell line to examine the role of AMPK in 3D spheroid formation and is the first report describing the generation of 3D spheroids using AMPK knockout cells. While control cells produced round spheroids with a similar length-to-width ratio, AMPK knockout produced an oval shape with a more significant length-to-width ratio. We demonstrate that AMPK knockout spheroids contain significantly more prominent lysosomes in each cell, indicating that autophagic flux is impaired in 3D spheroids. Finally, flow cytometry analysis showed that AMPK knockout spheroids contain more apoptotic cells than control cells. These results indicate that AMPK is required for efficient 3D spheroid formation.

LifeVol. 15(4)
Yong In University (KR), Yonsei University (KR), Korea Basic Science Institute (KR)
Affordable and clean energy
Openalex Percentile: Top 92%
Autophagy in Disease and Therapy
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