A high-quality chromosome-level genome assembly of Antiaris toxicaria
Here, we assembled two haplotypes of A. toxicaria, including a 671.73-Mb HapA subgenome containing 27,213 genes and a 666.41-Mb HapB subgenome containing 28,840 genes. Their contig N50 sizes were 90.18 and 90.29 Mb, respectively. The transposable elements represented 61.15% and 64.13% of the total assembled genome in HapA and HapB subgenome, respectively. A total of 27,213 and 28,840 genes were predicted in the two haplotypes. Hopefully, this chromosome-level genome of A. toxicaria will provide a valuable resource to enhance understanding of the biosynthesis of medicinal compounds.
Authors
- Wanzhen Liu (ORCID: https://orcid.org/0000-0003-2424-6673)
- Wei‐Cheng Huang (ORCID: https://orcid.org/0000-0003-4437-3530)
- Fang Ni (ORCID: https://orcid.org/0000-0002-7124-7268)
- Seping Dai
- Yuan Xiong (ORCID: https://orcid.org/0000-0003-1090-9288)
- Ya‐Mei Ding (ORCID: https://orcid.org/0000-0002-6603-0531)
- Jiaxin Xiang
- Hui Yu
Institutions
- Hong Kong Baptist University (HK)
- Chinese Academy of Sciences (CN)
- South China Botanical Garden (CN)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2025-03-24
- DOI
- https://doi.org/10.1186/s12863-025-01309-2
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.00