Network toxicology and molecular docking reveal key mechanisms of domoic acid neurotoxicity with bio-layer interferometry validation

The study aims to promote a network toxicology strategy to efficiently investigate the underlying neurotoxicity molecular mechanisms of domoic acid(DA), which is one of the main toxins of paralytic amnesic shellfish poisoning and has gained significant attention due to its ability to induce neurotoxicity. By utilizing ChEMBL, CTD, Drug bank, TTD, DGIdb, Pharmapper and GeneCards databases, we identified 73 potential targets associated with DA-exposure related amnesia and neurotoxicity. Further refinements via STRING and Cytoscape software highlight the protein-protein interactions. 30 targets were recognized by both the K-means algorithm and topological analysis. GO and KEGG pathway analysis conducted through DAVID databases reveals that these targets of amnesia and neurotoxicity are predominantly enriched in multiple pathways. AKT1 was identified by a multiple-topically methods as the key target. Molecular docking and bio-layer interferometry were conducted to confirm the binding between these targets and DA(-CDOCKER_INTERACTION_ENERGY =45.719 kcal/mol, K<sub>D</sub>=2.0E-11M). This research provides a theoretical basis for understanding the molecular mechanism of DA-induced neurotoxicity, as well as establishing a foundation for the prevention and treatment of DA exposure.

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Publication Details

Journal
Ecotoxicology and Environmental Safety
Published
2025-03-24
DOI
https://doi.org/10.1016/j.ecoenv.2025.118090
Citations
4
Primary Topic
Marine Toxins and Detection Methods
Type
article
Field-Weighted Citation Impact
3.44
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article

Network toxicology and molecular docking reveal key mechanisms of domoic acid neurotoxicity with bio-layer interferometry validation

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4 citations
Ecotoxicology and Environmental Safety
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article

Network toxicology and molecular docking reveal key mechanisms of domoic acid neurotoxicity with bio-layer interferometry validation

Yuxiao Tang, Yanru Liu, Diya Lv, Shitao Chen, Lianghua Wang, Feng Lü, Dongyao Wang, Hui Shen, Wen Yang, Yiping Liu
article en
4 citations

Abstract

The study aims to promote a network toxicology strategy to efficiently investigate the underlying neurotoxicity molecular mechanisms of domoic acid(DA), which is one of the main toxins of paralytic amnesic shellfish poisoning and has gained significant attention due to its ability to induce neurotoxicity. By utilizing ChEMBL, CTD, Drug bank, TTD, DGIdb, Pharmapper and GeneCards databases, we identified 73 potential targets associated with DA-exposure related amnesia and neurotoxicity. Further refinements via STRING and Cytoscape software highlight the protein-protein interactions. 30 targets were recognized by both the K-means algorithm and topological analysis. GO and KEGG pathway analysis conducted through DAVID databases reveals that these targets of amnesia and neurotoxicity are predominantly enriched in multiple pathways. AKT1 was identified by a multiple-topically methods as the key target. Molecular docking and bio-layer interferometry were conducted to confirm the binding between these targets and DA(-CDOCKER_INTERACTION_ENERGY =45.719 kcal/mol, K<sub>D</sub>=2.0E-11M). This research provides a theoretical basis for understanding the molecular mechanism of DA-induced neurotoxicity, as well as establishing a foundation for the prevention and treatment of DA exposure.

Ecotoxicology and Environmental SafetyVol. 294
Shenyang Pharmaceutical University (CN), Shanghai Medical College of Fudan University (CN), Naval University of Engineering (CN), Ministry of Education (KR)
Zero hunger
Openalex Percentile: Top 9%
Marine Toxins and Detection Methods
3.44
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