Adaptive adjustment of profile HMM significance thresholds improves functional and metabolic insights into microbial genomes

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Publication Details

Journal
Bioinformatics Advances
Published
2024-12-26
DOI
https://doi.org/10.1093/bioadv/vbaf039
Citations
8
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
1.64
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article

Adaptive adjustment of profile HMM significance thresholds improves functional and metabolic insights into microbial genomes

Samuel Miller, Kathryn Kananen, Patrick H. Bradley, Iva Veseli et al.
8 citations
Bioinformatics Advances
Genomics and Phylogenetic Studies
1.64
article

Adaptive adjustment of profile HMM significance thresholds improves functional and metabolic insights into microbial genomes

Samuel Miller, Kathryn Kananen, Patrick H. Bradley, Iva Veseli, A. Murat Eren, Carlos A. Perez
article en
8 citations

Abstract

Anvi'o is available at https://anvio.org under the GNU GPL license. Scripts and workflow are available at https://github.com/pbradleylab/2023-anvio-comparison under the MIT license.

Bioinformatics AdvancesVol. 5(1)
Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung (DE), Carl von Ossietzky Universität Oldenburg (DE), Marine Biological Laboratory (US), Helmholtz Institute for Functional Marine Biodiversity (DE), Max Planck Institute for Marine Microbiology (DE), The Ohio State University (US)
Openalex Percentile: Top 16%
Genomics and Phylogenetic Studies
1.64
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