ACP‐DPE: A Dual‐Channel Deep Learning Model for Anticancer Peptide Prediction
Cancer is a serious and complex disease caused by uncontrolled cell growth and is becoming one of the leading causes of death worldwide. Anticancer peptides (ACPs), as a bioactive peptide with lower toxicity, emerge as a promising means of effectively treating cancer. Identifying ACPs is challenging due to the limitation of experimental conditions. To address this, we proposed a dual-channel-based deep learning method, termed ACP-DPE, for ACP prediction. The ACP-DPE consisted of two parallel channels: one was an embedding layer followed by the bi-directional gated recurrent unit (Bi-GRU) module, and the other was an adaptive embedding layer followed by the dilated convolution module. The Bi-GRU module captured the peptide sequence dependencies, whereas the dilated convolution module characterised the local relationship of amino acids. Experimental results show that ACP-DPE achieves an accuracy of 82.81% and a sensitivity of 86.63%, surpassing the state-of-the-art method by 3.86% and 5.1%, respectively. These findings demonstrate the effectiveness of ACP-DPE for ACP prediction and highlight its potential as a valuable tool in cancer treatment research.
Authors
- Yujie Cao (ORCID: https://orcid.org/0009-0004-6341-024X)
- Guohua Huang (ORCID: https://orcid.org/0000-0001-6954-3933)
- Weihong Chen (ORCID: https://orcid.org/0009-0004-0292-3447)
- Qi Dai (ORCID: https://orcid.org/0000-0002-4693-2968)
Institutions
- Zhejiang Sci-Tech University (CN)
- Shaoyang University (CN)
- Hunan University of Finance and Economics (CN)
Publication Details
- Journal
- IET Systems Biology
- Published
- 2025-01-01
- DOI
- https://doi.org/10.1049/syb2.70010
- Citations
- 3
- Primary Topic
- Machine Learning in Bioinformatics
- Type
- article
- Field-Weighted Citation Impact
- 2.42
Funders
- Shaoyang University