Genome‐Wide Identification, Molecular Evolution, and Expression Divergence of <scp><i>CLC</i></scp>, <scp><i>ALMT</i></scp>, <scp><i>VDAC</i></scp>, and <scp><i>MSL</i></scp> Gene Family in Barley

Organic and inorganic nutrients, osmotic components, associated protein cofactors, and signaling molecules regulate biotic and abiotic stresses in plants. Earlier reports suggest that plant cells activate anion channels and induce the efflux of anions at the plasma membrane under drought. Herein, <i>CHLORIDE CHANNEL</i> (<i>CLC</i>), <i>ALUMINUM-ACTIVATED MALATE TRANSPORTER</i> (<i>ALMT</i>), <i>VOLTAGE-DEPENDENT ANION CHANNEL</i> (<i>VDAC</i>), and MECHANOSENSITIVE CHANNEL of SMALL CONDUCTANCE-LIKE (<i>MscS-like</i>, <i>MSL</i>) gene family were reported in barley. Totally, 43 anion channel proteins were identified in barley at the genome-wide level. Expression profiles of anion channel genes were obtained from public databases and verified by qRT-PCR. In addition, the expression pattern of the anion channel gene family in multiple tissues among ten land plants showed the organs in which it is actively expressed, and 43 anion channel genes were expressed in diverse tissues, such as tillers, epidermal strips, inflorescences, and grain in barley. The expression of anion channel genes was performed in ten different cultivars and wild barley, of which 17 genes were confirmed by qRT-PCR under drought treatment, suggesting that different cultivars have diverse anion channel genes in response to drought stress. The plants with high transcripts of these genes demonstrated stronger tolerance to drought stress and element content (e.g., potassium, calcium). The results might help to further elucidate the molecular mechanism of anion channels related to stress and provide a toolkit for enhancing the drought tolerance of barley.

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Publication Details

Journal
Food Science & Nutrition
Published
2025-03-01
DOI
https://doi.org/10.1002/fsn3.70110
Citations
3
Primary Topic
Plant Stress Responses and Tolerance
Type
article
Field-Weighted Citation Impact
5.25

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article

Genome‐Wide Identification, Molecular Evolution, and Expression Divergence of CLC, ALMT, VDAC, and MSL Gene Family in Barley

Haiyang Tang, Tao Tong, Yuan Qin, Zhong‐Hua Chen et al.
3 citations
Food Science & Nutrition
Plant Stress Responses and Tolerance
5.25
article

Genome‐Wide Identification, Molecular Evolution, and Expression Divergence of CLC, ALMT, VDAC, and MSL Gene Family in Barley

Haiyang Tang, Tao Tong, Yuan Qin, Zhong‐Hua Chen, Fanrong Zeng, Fenglin Deng, Wei Jie Jiang, Qingfeng Zheng, Adeel Riaz, Guang Chen, Dong Liu, Ying Fu
article en
3 citations

Abstract

Organic and inorganic nutrients, osmotic components, associated protein cofactors, and signaling molecules regulate biotic and abiotic stresses in plants. Earlier reports suggest that plant cells activate anion channels and induce the efflux of anions at the plasma membrane under drought. Herein, <i>CHLORIDE CHANNEL</i> (<i>CLC</i>), <i>ALUMINUM-ACTIVATED MALATE TRANSPORTER</i> (<i>ALMT</i>), <i>VOLTAGE-DEPENDENT ANION CHANNEL</i> (<i>VDAC</i>), and MECHANOSENSITIVE CHANNEL of SMALL CONDUCTANCE-LIKE (<i>MscS-like</i>, <i>MSL</i>) gene family were reported in barley. Totally, 43 anion channel proteins were identified in barley at the genome-wide level. Expression profiles of anion channel genes were obtained from public databases and verified by qRT-PCR. In addition, the expression pattern of the anion channel gene family in multiple tissues among ten land plants showed the organs in which it is actively expressed, and 43 anion channel genes were expressed in diverse tissues, such as tillers, epidermal strips, inflorescences, and grain in barley. The expression of anion channel genes was performed in ten different cultivars and wild barley, of which 17 genes were confirmed by qRT-PCR under drought treatment, suggesting that different cultivars have diverse anion channel genes in response to drought stress. The plants with high transcripts of these genes demonstrated stronger tolerance to drought stress and element content (e.g., potassium, calcium). The results might help to further elucidate the molecular mechanism of anion channels related to stress and provide a toolkit for enhancing the drought tolerance of barley.

Food Science & NutritionVol. 13(3)
Nanjing Agricultural University (CN), Yangtze University (CN), ZheJiang Academy of Agricultural Sciences (CN), Beijing Academy of Agricultural and Forestry Sciences (CN), Western Sydney University (AU)
National Natural Science Foundation of China, Sichuan Agricultural University, Nanjing Agricultural University, Postdoctoral Research Foundation of China
Openalex Percentile: Top 6%
Plant Stress Responses and Tolerance
5.25
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