Hi-GDT: A Hi-C-based 3D gene domain analysis tool for analyzing local chromatin contacts in plants

Hi-GDT is a valuable tool for identifying genes regulated by dynamic 3D conformational changes, expanding our understanding of the structural and functional relevance of local 3D chromatin organization in plants. Hi-GDT is publicly available at https://github.com/CDL-HongwooLee/Hi-GDT.

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Publication Details

Journal
GigaScience
Published
2025-01-01
DOI
https://doi.org/10.1093/gigascience/giaf020
Citations
1
Primary Topic
Genomics and Chromatin Dynamics
Type
article
Field-Weighted Citation Impact
0.81

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article

Hi-GDT: A Hi-C-based 3D gene domain analysis tool for analyzing local chromatin contacts in plants

Pil Joon Seo, Hongwoo Lee
1 citations
GigaScience
Genomics and Chromatin Dynamics
0.81
article

Hi-GDT: A Hi-C-based 3D gene domain analysis tool for analyzing local chromatin contacts in plants

Pil Joon Seo, Hongwoo Lee
article en
1 citations

Abstract

Hi-GDT is a valuable tool for identifying genes regulated by dynamic 3D conformational changes, expanding our understanding of the structural and functional relevance of local 3D chromatin organization in plants. Hi-GDT is publicly available at https://github.com/CDL-HongwooLee/Hi-GDT.

GigaScienceVol. 14
Seoul National University (KR)
National Research Foundation of Korea, Basic Research Laboratory
Life in Land
Openalex Percentile: Top 30%
Genomics and Chromatin Dynamics
0.81
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