Modeling Carbon Basicity
This work presents a predictive model of aqueous ionization constants (pK<sub>a</sub>) of protonatable carbons in certain aromatic rings. The phenomenon of carbon atoms sometimes acting as a stable and reversible base accepting a proton in water solution is surprisingly little recognized in medicinal chemistry, although known to general chemists for the past 60+years. We present the development and results for two predictive models: 1) identifying the most basic carbon in a ring, and 2) calculating the resulting microscopic pK<sub>a</sub> value. Both models were incorporated into our global (i. e., taking all ionizable groups into account) S+pKa model.[1-2].
Authors
- Robert Fraczkiewicz (ORCID: https://orcid.org/0000-0003-1737-6787)
- Marvin Waldman (ORCID: https://orcid.org/0009-0008-2548-6402)
Institutions
- Simulations Plus (United States) (US)
Publication Details
- Journal
- Molecular Informatics
- Published
- 2025-03-01
- DOI
- https://doi.org/10.1002/minf.202400296
- Primary Topic
- Chemical Reaction Mechanisms
- Type
- article
- Field-Weighted Citation Impact
- 0.00