Dynamic Topic Modeling Techniques for Evolving Medical Texts with UMLS Concepts

In the realm of biomedical research, efficiently extracting and categorising subjects from enormous amounts of medical texts is crucial for knowledge discovery and information retrieval. Traditional topic modelling approaches are useful, but they usually fall short in capturing the intricate semantics of medical terminology. This study investigates the potential benefits of using Unified Medical Language System (UMLS) principles to topic modelling using the MedMentions dataset. We employ four techniques: BERTopic, Latent Dirichlet Allocation (LDA), Hybrid LDA and RNN, and a novel Hybrid BERTopic with Recurrent Neural Networks (RNN). By incorporating UMLS concepts into these models, we hope to improve subject coherence and relevance. According to our research, in terms of clinical relevance and topic coherence.

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Publication Details

Journal
International Journal of Computer Communication and Informatics
Published
2024-12-28
DOI
https://doi.org/10.34256/ijcci2425
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
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article

Dynamic Topic Modeling Techniques for Evolving Medical Texts with UMLS Concepts

S Jayabharathi, M Logambal
International Journal of Computer Communication and Informatics
Biomedical Text Mining and Ontologies
article

Dynamic Topic Modeling Techniques for Evolving Medical Texts with UMLS Concepts

S Jayabharathi, M Logambal
article en

Abstract

In the realm of biomedical research, efficiently extracting and categorising subjects from enormous amounts of medical texts is crucial for knowledge discovery and information retrieval. Traditional topic modelling approaches are useful, but they usually fall short in capturing the intricate semantics of medical terminology. This study investigates the potential benefits of using Unified Medical Language System (UMLS) principles to topic modelling using the MedMentions dataset. We employ four techniques: BERTopic, Latent Dirichlet Allocation (LDA), Hybrid LDA and RNN, and a novel Hybrid BERTopic with Recurrent Neural Networks (RNN). By incorporating UMLS concepts into these models, we hope to improve subject coherence and relevance. According to our research, in terms of clinical relevance and topic coherence.

International Journal of Computer Communication and InformaticsVol. 6(2)
University College for Women (IN)
Openalex Percentile: Top 77%
Biomedical Text Mining and Ontologies
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