Transcriptomic Responses of Gonadal Development to Photoperiod Regulation in Amur Minnow (Phoxinus lagowskii)

Photoperiod regulates reproductive physiology in many fishes, but its sex-specific molecular effects under artificial manipulation remain unclear, especially in cold-water species. In this study, we investigated whether photoperiod manipulation during the reproductive season could modulate the rate and efficiency of gonadal development in the Amur minnow (Phoxinus lagowskii). High-throughput RNA sequencing was used to analyze transcriptomic responses of gonadal tissues under three photoperiod regimes: natural light (12L:12D), continuous light (24L:0D), and continuous darkness (0L:24D) over a 9-week experimental period. Our results revealed distinct sex-specific gonadal responses to photoperiodic changes. In males, continuous light significantly promoted spermatogenesis by upregulating meiosis-related genes (REC114 and syp3) and steroid biosynthesis. In females, prolonged light exposure induced ovarian stress, evidenced by vitellogenin (Vtg3) upregulation and retinoic acid suppression, whereas continuous darkness promoted lipid storage via downregulation of gluconeogenesis (PC and Fbp2) and fatty acid oxidation (ACSL1a). Additionally, immune activation, marked by IL1RAPL1-A upregulation, was observed in all groups except continuous-light males, with females exhibiting broader immune pathway engagement. These findings provide novel insights into the regulatory mechanisms of photoperiod-induced gonadal development and highlight potential strategies for optimising photoperiod management in cold-water fish aquaculture.