Molecular structures with spectroscopic accuracy at DFT cost by the templating synthon approach and the PCS141 database

The computation of accurate geometric parameters at density functional theory cost for large molecules in the gas phase is addressed through a novel strategy that combines quantum chemical models with machine learning techniques. The first key step is the expansion of a database of accurate semi-experimental equilibrium structures with additional molecular geometries optimized by version 2 of the Pisa composite scheme. Then, the templating synthon approach is used to improve the accuracy of structures optimized by a hybrid density functional paired with a double zeta basis set, leveraging chemical similarity to cluster different molecular environments and refine bond lengths and valence angles. A set of prototypical biomolecular building blocks is used to demonstrate that it is possible to achieve spectroscopic accuracy for molecular systems too large to be treated by state-of-the-art composite wavefunction methods. In addition, a freely accessible web-based tool has been developed to facilitate the post-processing of geometries optimized using standard electronic structure codes, thereby providing an accurate and efficient tool for the computational study of medium- to large-sized molecules, also accessible to experiment-oriented researchers.

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Publication Details

Journal
The Journal of Chemical Physics
Published
2025-03-20
DOI
https://doi.org/10.1063/5.0255564
Citations
14
Primary Topic
Advanced Chemical Physics Studies
Type
article
Field-Weighted Citation Impact
17.45
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article

Molecular structures with spectroscopic accuracy at DFT cost by the templating synthon approach and the PCS141 database

Luigi Crisci, Silvia Di Grande, Federico Lazzari, Marco Mendolicchio et al.
14 citations
The Journal of Chemical Physics
Advanced Chemical Physics Studies
17.45
article

Molecular structures with spectroscopic accuracy at DFT cost by the templating synthon approach and the PCS141 database

Luigi Crisci, Silvia Di Grande, Federico Lazzari, Marco Mendolicchio, Vincenzo Barone
article en
14 citations

Abstract

The computation of accurate geometric parameters at density functional theory cost for large molecules in the gas phase is addressed through a novel strategy that combines quantum chemical models with machine learning techniques. The first key step is the expansion of a database of accurate semi-experimental equilibrium structures with additional molecular geometries optimized by version 2 of the Pisa composite scheme. Then, the templating synthon approach is used to improve the accuracy of structures optimized by a hybrid density functional paired with a double zeta basis set, leveraging chemical similarity to cluster different molecular environments and refine bond lengths and valence angles. A set of prototypical biomolecular building blocks is used to demonstrate that it is possible to achieve spectroscopic accuracy for molecular systems too large to be treated by state-of-the-art composite wavefunction methods. In addition, a freely accessible web-based tool has been developed to facilitate the post-processing of geometries optimized using standard electronic structure codes, thereby providing an accurate and efficient tool for the computational study of medium- to large-sized molecules, also accessible to experiment-oriented researchers.

The Journal of Chemical PhysicsVol. 162(11)
Scuola Normale Superiore (IT), Scuola Superiore Meridionale (IT), National Interuniversity Consortium of Materials Science and Technology (IT)
Openalex Percentile: Top 1%
Advanced Chemical Physics Studies
17.45
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Molecular structures with spectroscopic accuracy at DFT cost by the templating synthon approach and the PCS141 database — Luigi Crisci, Silvia Di Grande, et al. · The Journal of Chemical Physics (2025) | TGRS Research Map | TGRS