Predicting Fluorescence Emission Wavelengths and Quantum Yields via Machine Learning

The search for functional fluorescent organic materials can significantly benefit from the rapid and accurate predictions of photophysical properties. However, screening large numbers of potential fluorophore molecules in different solvents faces limitations of quantum mechanical calculations and experimental measurements. In this work, we develop machine learning (ML) algorithms for predicting the fluorescence of a molecule, focusing on two target properties: emission wavelengths (WLs) and quantum yields (QYs). For this purpose, we employ the Deep4Chem database which contains the optical properties of 20,236 combinations of 7,016 chromophores in 365 different solvents. Several chemical descriptors, or features, were selected as inputs for each model, and each molecule was characterized by its SMILES fingerprint. The Shapley additive explanations (SHAP) technique was used to rationalize the results, showing that the most impactful properties are chromophore-related, as expected from chemical intuition. For the best-performing model, the Random Forest, our results for the test set show a root-mean-square error (RMSE) of 28.8 nm (0.15 eV) for WLs and 0.19 for QYs. The developed ML models were used to predict, thus completing, the missing results for the WL and QY target properties in the original Deep4Chem database, resulting in two new databases: one for each property. Testing our ML models for each target property in molecules not included in the original Deep4Chem database gave good results.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-03-20
DOI
https://doi.org/10.1021/acs.jcim.4c02403
Citations
11
Primary Topic
Advanced Fluorescence Microscopy Techniques
Type
article
Field-Weighted Citation Impact
17.97

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article

Predicting Fluorescence Emission Wavelengths and Quantum Yields via Machine Learning

Ronaldo Ribeiro Goldschmidt, Itamar Borges, Rubens C. Souza, Júlio César Duarte
11 citations
Journal of Chemical Information and Modeling
Advanced Fluorescence Microscopy Techniques
17.97
article

Predicting Fluorescence Emission Wavelengths and Quantum Yields via Machine Learning

Ronaldo Ribeiro Goldschmidt, Itamar Borges, Rubens C. Souza, Júlio César Duarte
article en
11 citations

Abstract

The search for functional fluorescent organic materials can significantly benefit from the rapid and accurate predictions of photophysical properties. However, screening large numbers of potential fluorophore molecules in different solvents faces limitations of quantum mechanical calculations and experimental measurements. In this work, we develop machine learning (ML) algorithms for predicting the fluorescence of a molecule, focusing on two target properties: emission wavelengths (WLs) and quantum yields (QYs). For this purpose, we employ the Deep4Chem database which contains the optical properties of 20,236 combinations of 7,016 chromophores in 365 different solvents. Several chemical descriptors, or features, were selected as inputs for each model, and each molecule was characterized by its SMILES fingerprint. The Shapley additive explanations (SHAP) technique was used to rationalize the results, showing that the most impactful properties are chromophore-related, as expected from chemical intuition. For the best-performing model, the Random Forest, our results for the test set show a root-mean-square error (RMSE) of 28.8 nm (0.15 eV) for WLs and 0.19 for QYs. The developed ML models were used to predict, thus completing, the missing results for the WL and QY target properties in the original Deep4Chem database, resulting in two new databases: one for each property. Testing our ML models for each target property in molecules not included in the original Deep4Chem database gave good results.

Journal of Chemical Information and ModelingVol. 65(7)
Military Institute of Engineering (BR)
Conselho Nacional de Desenvolvimento Científico e Tecnológico, Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio de Janeiro
Affordable and clean energy
Openalex Percentile: Top 1%
Advanced Fluorescence Microscopy Techniques
17.97
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Predicting Fluorescence Emission Wavelengths and Quantum Yields via Machine Learning — Ronaldo Ribeiro Goldschmidt, Itamar Borges, et al. · Journal of Chemical Information and Modeling (2025) | TGRS Research Map | TGRS