Species Differentiation of Two Endemic Montane Oaks in China: Population Genetics, Ecological Niche and Leaf Morphology Analyses

Oaks in the genus Quercus L. are keystone species in the forest ecosystem and are considered ideal models for the study of plant evolution. In this research, we applied population genetics, ecological niche analysis and phenotypic traits to explore patterns of species differentiation and demographic history of two Chinese montane oak species (Quercus baronii Skan and Quercus dolicholepis A. Camus) from Quercus section Ilex across species distribution ranges. Analyses of population genetics with ten nuclear microsatellite loci on 33 populations of the two oak species indicated great interspecific genetic variations with distinct genetic backgrounds for the two oaks. Simulations on species demography suggested a speciation-without-migration model as the best to explain species divergence, while an approximate Bayesian computation analysis indicated that the two studied oak species probably split at about 17.80–28.48 Ma. A comparison of two core bioclimatic factors and ecological niche tests revealed strong niche differentiation between the two oak species, and association analysis also found a significantly positive correlation between interspecific genetic variations and bioclimatic distances. Additionally, analyses of the leaf morphology of 117 specimens with five quantitative characteristics showed clear species discrepancy between Q. baronii and Q. dolicholepis. Based on this evidence from genetic, ecological and phenotypic analyses, our research indicated clear species differentiation between Q. baronii and Q. dolicholepis, possibly in relation to an early species divergence and varying adaptative features of the two oaks shaped by heterogeneous environments within Qinling-Daba Mountains and surroundings. This study provides an example for future investigation of species differentiation and evolution among related oak species with integrated analyses and highlights the importance of ecological conditions on adaptive evolution and genetic conservation of endemic tree species in montane regions.