Metabolic Engineering of <i>E. coli</i> for Enhanced Diols Production from Acetate

Effective employment of renewable carbon sources is highly demanded to develop sustainable biobased manufacturing. Here, we developed <i>Escherichia coli</i> strains to produce 2,3-butanediol and acetoin (collectively referred to as diols) using acetate as the sole carbon source by stepwise metabolic engineering. When tested in fed-batch experiments, the strain overexpressing the entire acetate utilization pathway was found to consume acetate at a 15% faster rate (0.78 ± 0.05 g/g/h) and to produce a 35% higher diol titer (1.16 ± 0.01 g/L) than the baseline diols-producing strain. Moreover, singularly overexpressing the genes encoding alternative acetate uptake pathways as well as alternative isoforms of genes in the malate-to-pyruvate pathway unveiled that leveraging <i>ackA-pta</i> and <i>maeA</i> is more effective in enhancing acetate consumption and diols production, compared to <i>acs</i> and <i>maeB</i>. Finally, the increased substrate consumption rate and diol production obtained in flask-based experiments were confirmed in bench-scale bioreactors operated in fed-batch mode. Consequently, the highest titer of 1.56 g/L achieved in this configuration increased by over 30% compared to the only other similar effort carried out so far.

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Publication Details

Journal
ACS Synthetic Biology
Published
2025-03-19
DOI
https://doi.org/10.1021/acssynbio.4c00839
Citations
9
Primary Topic
Microbial Metabolic Engineering and Bioproduction
Type
article
Field-Weighted Citation Impact
7.25
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article

Metabolic Engineering of E. coli for Enhanced Diols Production from Acetate

Yuexuan Zu, Gregory Stephanopoulos, Candido Fabrizio Pirri, Xuecong Cen et al.
9 citations
ACS Synthetic Biology
Microbial Metabolic Engineering and Bioproduction
7.25
article

Metabolic Engineering of E. coli for Enhanced Diols Production from Acetate

Yuexuan Zu, Gregory Stephanopoulos, Candido Fabrizio Pirri, Xuecong Cen, Angela Re, Giacomo Antonicelli, Debora Fino, Benjamin M. Woolston, Zhen Chen, Luca Ricci
article en
9 citations

Abstract

Effective employment of renewable carbon sources is highly demanded to develop sustainable biobased manufacturing. Here, we developed <i>Escherichia coli</i> strains to produce 2,3-butanediol and acetoin (collectively referred to as diols) using acetate as the sole carbon source by stepwise metabolic engineering. When tested in fed-batch experiments, the strain overexpressing the entire acetate utilization pathway was found to consume acetate at a 15% faster rate (0.78 ± 0.05 g/g/h) and to produce a 35% higher diol titer (1.16 ± 0.01 g/L) than the baseline diols-producing strain. Moreover, singularly overexpressing the genes encoding alternative acetate uptake pathways as well as alternative isoforms of genes in the malate-to-pyruvate pathway unveiled that leveraging <i>ackA-pta</i> and <i>maeA</i> is more effective in enhancing acetate consumption and diols production, compared to <i>acs</i> and <i>maeB</i>. Finally, the increased substrate consumption rate and diol production obtained in flask-based experiments were confirmed in bench-scale bioreactors operated in fed-batch mode. Consequently, the highest titer of 1.56 g/L achieved in this configuration increased by over 30% compared to the only other similar effort carried out so far.

ACS Synthetic BiologyVol. 14(4)
Northeastern University (US), Politecnico di Torino (IT), Rina Services (Italy) (IT), Italian Institute of Technology (IT), Center for Sustainable Future Technologies (IT), Massachusetts Institute of Technology (US), Tsinghua University (CN)
Openalex Percentile: Top 3%
Microbial Metabolic Engineering and Bioproduction
7.25
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