FAIR Digital Objects in Autosubmit Workflows

Climate and weather models are, respectively, complex computer programs used to better understand and predict the climate and to forecast weather. Running these programs involves a series of tasks that may require the use of other computer programs and scripts to prepare the input data, replace values in configuration files (e.g. Fortran namelists), prepare parameters for a batch server used in a high-performance computing facility (e.g. Slurm user configuration, project details, job request, etc.), among other possible variables. There are multiple challenges to make these programs and their outputs FAIR (Findable, Accessible, Interoperable, and Reusable) digital objects. The use of computational workflows executed with workflow managers eases the configuration and execution of climate and weather models, encapsulating some of its complexity, and contributes to a more uniform collection of provenance information about the execution of these models. In this article we focus on Autosubmit, an experiment and workflow manager used for running weather, air quality, and climate experiments that implements the Workflow Run RO-Crate profile to archive provenance information. We also highlight points that are not covered by RO-Crate and explain how we plan to address these shortcomings through recommendations found in FDO specifications.

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Publication Details

Journal
Open Conference Proceedings
Published
2025-03-18
DOI
https://doi.org/10.52825/ocp.v5i.1416
Primary Topic
Scientific Computing and Data Management
Type
article
Field-Weighted Citation Impact
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article

FAIR Digital Objects in Autosubmit Workflows

Miguel Castrillo, Edgar Garriga Nogales, Bruno P. Kinoshita, Manuel Giménez de Castro Marciani
Open Conference Proceedings
Scientific Computing and Data Management
article

FAIR Digital Objects in Autosubmit Workflows

Miguel Castrillo, Edgar Garriga Nogales, Bruno P. Kinoshita, Manuel Giménez de Castro Marciani
article en

Abstract

Climate and weather models are, respectively, complex computer programs used to better understand and predict the climate and to forecast weather. Running these programs involves a series of tasks that may require the use of other computer programs and scripts to prepare the input data, replace values in configuration files (e.g. Fortran namelists), prepare parameters for a batch server used in a high-performance computing facility (e.g. Slurm user configuration, project details, job request, etc.), among other possible variables. There are multiple challenges to make these programs and their outputs FAIR (Findable, Accessible, Interoperable, and Reusable) digital objects. The use of computational workflows executed with workflow managers eases the configuration and execution of climate and weather models, encapsulating some of its complexity, and contributes to a more uniform collection of provenance information about the execution of these models. In this article we focus on Autosubmit, an experiment and workflow manager used for running weather, air quality, and climate experiments that implements the Workflow Run RO-Crate profile to archive provenance information. We also highlight points that are not covered by RO-Crate and explain how we plan to address these shortcomings through recommendations found in FDO specifications.

Open Conference ProceedingsVol. 5
Barcelona Supercomputing Center (ES), Universitat Politècnica de Catalunya (ES)
Openalex Percentile: Top 89%
Scientific Computing and Data Management
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