A chromosome-level genome assembly of eriophyoid mite Setoptus koraiensis
Eriophyoidea represents a highly diverse superfamily of herbivorous mites in the Acariformes, including over 5,000 named species that are distributed worldwide. However, the lack of chromosome-level genome prevents our understanding of the evolution in this group. Here, we report the first chromosome-level genome assembly of Setoptus koraiensis using Illumina, PacBio, and Hi-C sequencing technologies. The assembled genome has a size of 47 Mb with an N50 of 24.53 Mb, anchored into two chromosomes. The chromosome-level genome assembly had a BUSCO completeness of 89%. We identified 5,954 protein-coding genes, with 4,770 genes that could be functionally annotated. This genome provides resources to further understand the genetic and evolution of eriophyoid mites.
Authors
- Jing‐Tao Sun (ORCID: https://orcid.org/0000-0002-8263-7210)
- Lei Chen (ORCID: https://orcid.org/0000-0002-8555-6379)
- Xiao–Feng Xue (ORCID: https://orcid.org/0000-0002-6374-8601)
- Zi‐Kai Shao
Institutions
- Nanjing Agricultural University (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2025-03-18
- DOI
- https://doi.org/10.1038/s41597-025-04814-2
- Citations
- 1
- Primary Topic
- Study of Mite Species
- Type
- article
- Field-Weighted Citation Impact
- 3.03
Funders
- National Natural Science Foundation of China