Association of <i>PNPLA3</i> rs738409 C &gt; G and rs2896019 T &gt; G Polymorphisms with Nonalcoholic Fatty Liver Disease in a Turkish Population from Adıyaman Province

<b><i>Objectives:</i></b> The purpose of this study was to investigate the effect of patatin-like phospholipase domain-containing protein 3 (<i>PNPLA3</i>) rs738409 C > G and rs2896019 T > G polymorphisms on genetic susceptibility to nonalcoholic fatty liver disease (NAFLD) in a Turkish population from Adıyaman province, located in the Southeast Anatolia Region of Turkey. <b><i>Materials and Methods:</i></b> This hospital-based molecular epidemiological case-control study analyzed the <i>PNPLA3</i> rs738409 C > G and rs2896019 T > G polymorphisms in 335 NAFLD cases and 410 healthy controls. Genotype frequencies were determined using real-time polymerase chain reaction with the TaqMan assay. The association with NAFLD susceptibility was evaluated by calculating odds ratios (ORs) and 95% confidence intervals (CIs) using an unconditional logistic regression model. <b><i>Results:</i></b> We found that the <i>PNPLA3</i> rs738409 C > G (CC vs. GG: OR = 1.90, 95% CI = 1.05-3.44) and rs2896019 T > G (TT vs. GG: OR = 3.24, 95% CI = 1.44-7.27) polymorphisms were linked to an increased risk of NAFLD in almost all genetic models (<i>p</i> < 0.05). In addition, the <i>PNPLA3</i> Grs738409/Grs2896019 haplotype was associated with NAFLD development (<i>p</i> < 0.05). Significant differences in alanine aminotransferase and aspartate aminotransferase enzyme levels were observed across the genotypes of these polymorphisms (<i>p</i> < 0.05). <b><i>Conclusion:</i></b> This is the first study on <i>PNPLA3</i> single nucleotide polymorphisms (SNPs) and NAFLD in the Turkish population of Adıyaman Province, Southeast Anatolia. Our findings suggest that the <i>PNPLA3</i> rs738409 C > G and rs2896019 T > G polymorphisms, along with their haplotypes, may influence NAFLD susceptibility. Further independent studies with larger sample sizes and diverse populations are needed to confirm these results.

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Journal
Genetic Testing and Molecular Biomarkers
Published
2025-03-01
DOI
https://doi.org/10.1089/gtmb.2024.0481
Primary Topic
Liver Disease Diagnosis and Treatment
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article
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0.00
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article

Association of PNPLA3 rs738409 C > G and rs2896019 T > G Polymorphisms with Nonalcoholic Fatty Liver Disease in a Turkish Population from Adıyaman Province

Süleyman Bayram, Yakup Ülger
Genetic Testing and Molecular Biomarkers
Liver Disease Diagnosis and Treatment
article

Association of PNPLA3 rs738409 C > G and rs2896019 T > G Polymorphisms with Nonalcoholic Fatty Liver Disease in a Turkish Population from Adıyaman Province

Süleyman Bayram, Yakup Ülger
article en

Abstract

<b><i>Objectives:</i></b> The purpose of this study was to investigate the effect of patatin-like phospholipase domain-containing protein 3 (<i>PNPLA3</i>) rs738409 C > G and rs2896019 T > G polymorphisms on genetic susceptibility to nonalcoholic fatty liver disease (NAFLD) in a Turkish population from Adıyaman province, located in the Southeast Anatolia Region of Turkey. <b><i>Materials and Methods:</i></b> This hospital-based molecular epidemiological case-control study analyzed the <i>PNPLA3</i> rs738409 C > G and rs2896019 T > G polymorphisms in 335 NAFLD cases and 410 healthy controls. Genotype frequencies were determined using real-time polymerase chain reaction with the TaqMan assay. The association with NAFLD susceptibility was evaluated by calculating odds ratios (ORs) and 95% confidence intervals (CIs) using an unconditional logistic regression model. <b><i>Results:</i></b> We found that the <i>PNPLA3</i> rs738409 C > G (CC vs. GG: OR = 1.90, 95% CI = 1.05-3.44) and rs2896019 T > G (TT vs. GG: OR = 3.24, 95% CI = 1.44-7.27) polymorphisms were linked to an increased risk of NAFLD in almost all genetic models (<i>p</i> < 0.05). In addition, the <i>PNPLA3</i> Grs738409/Grs2896019 haplotype was associated with NAFLD development (<i>p</i> < 0.05). Significant differences in alanine aminotransferase and aspartate aminotransferase enzyme levels were observed across the genotypes of these polymorphisms (<i>p</i> < 0.05). <b><i>Conclusion:</i></b> This is the first study on <i>PNPLA3</i> single nucleotide polymorphisms (SNPs) and NAFLD in the Turkish population of Adıyaman Province, Southeast Anatolia. Our findings suggest that the <i>PNPLA3</i> rs738409 C > G and rs2896019 T > G polymorphisms, along with their haplotypes, may influence NAFLD susceptibility. Further independent studies with larger sample sizes and diverse populations are needed to confirm these results.

Genetic Testing and Molecular BiomarkersVol. 29(3)
University of Health Science (KH), Cukurova University (TR)
Openalex Percentile: Top 92%
Liver Disease Diagnosis and Treatment
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