Identification of the Hub Gene <scp>LDB3</scp> in Stanford Type A Aortic Dissection Based on Comprehensive Bioinformatics Analysis

Stanford type A aortic dissection (TAAD) is a life-threatening disease. This study explored the role of LIM domain binding 3 (LDB3) in TAAD progression. Four datasets from the Gene Expression Omnibus were analyzed to identify TAAD-related hub genes. LDB3 single nucleotide polymorphisms (SNPs) were assessed in the UK Biobank. Western blotting and immunofluorescence detected LDB3 expression in angiotensin II (Ang II) stimulated human aortic vascular smooth muscle cells (HA-VSMC), human samples, and a murine model. Bioinformatics identified tissue inhibitor of metalloproteinase-1 (TIMP1) and LDB3 as TAAD hub genes. TIMP1 was expressed in macrophages, mesenchymal cells, and smooth muscle cells, while LDB3 was mostly expressed in smooth muscle cells. Validation showed TIMP1 was upregulated and LDB3 downregulated in TAAD. Six LDB3 SNPs were associated with aortic aneurysm and dissection in the UK Biobank. In human and murine samples, LDB3 expression was reduced in diseased tissues and co-localized with smooth muscle. Ang II-stimulated HA-VSMC exhibited LDB3 reduction and altered intercellular connections. The aforementioned findings suggest that the newly identified gene LDB3 is crucial in the progression of TAAD.

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Journal
Journal of Cellular and Molecular Medicine
Published
2025-03-01
DOI
https://doi.org/10.1111/jcmm.70471
Citations
1
Primary Topic
Aortic aneurysm repair treatments
Type
article
Field-Weighted Citation Impact
1.52

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article

Identification of the Hub Gene LDB3 in Stanford Type A Aortic Dissection Based on Comprehensive Bioinformatics Analysis

Xinyi Liu, Huadong Li, Yipeng Ge, Bin Wan et al.
1 citations
Journal of Cellular and Molecular Medicine
Aortic aneurysm repair treatments
1.52
article

Identification of the Hub Gene LDB3 in Stanford Type A Aortic Dissection Based on Comprehensive Bioinformatics Analysis

Xinyi Liu, Huadong Li, Yipeng Ge, Bin Wan, Haiou Hu, Hong Yu, Junming Zhu, Meng Zhao, Xing Liu
article en
1 citations

Abstract

Stanford type A aortic dissection (TAAD) is a life-threatening disease. This study explored the role of LIM domain binding 3 (LDB3) in TAAD progression. Four datasets from the Gene Expression Omnibus were analyzed to identify TAAD-related hub genes. LDB3 single nucleotide polymorphisms (SNPs) were assessed in the UK Biobank. Western blotting and immunofluorescence detected LDB3 expression in angiotensin II (Ang II) stimulated human aortic vascular smooth muscle cells (HA-VSMC), human samples, and a murine model. Bioinformatics identified tissue inhibitor of metalloproteinase-1 (TIMP1) and LDB3 as TAAD hub genes. TIMP1 was expressed in macrophages, mesenchymal cells, and smooth muscle cells, while LDB3 was mostly expressed in smooth muscle cells. Validation showed TIMP1 was upregulated and LDB3 downregulated in TAAD. Six LDB3 SNPs were associated with aortic aneurysm and dissection in the UK Biobank. In human and murine samples, LDB3 expression was reduced in diseased tissues and co-localized with smooth muscle. Ang II-stimulated HA-VSMC exhibited LDB3 reduction and altered intercellular connections. The aforementioned findings suggest that the newly identified gene LDB3 is crucial in the progression of TAAD.

Journal of Cellular and Molecular MedicineVol. 29(6)
Union Hospital (HK), Army Medical University (CN), Capital Medical University (CN), Fudan University (CN), Xinqiao Hospital (CN), Beijing Anzhen Hospital (CN), Wuhan Union Hospital (CN), Max Planck Institute for Human Cognitive and Brain Sciences (DE), Huazhong University of Science and Technology (CN)
National Key Research and Development Program of China
Openalex Percentile: Top 21%
Aortic aneurysm repair treatments
1.52
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