Machine learning reveals glycolytic key gene in gastric cancer prognosis

Glycolysis is recognized as a central metabolic pathway in the neoplastic evolution of gastric cancer, exerting profound effects on the tumor microenvironment and the neoplastic growth trajectory. However, the identification of key glycolytic genes that significantly affect gastric cancer prognosis remains underexplored. In this work, five machine-learning algorithms were used to elucidate the intimate association between the glycolysis-associated gene phosphofructokinase fructose-bisphosphate 3 (PFKFB3) and the prognosis of gastric cancer patients. Validation across multiple independent datasets confirmed the prognostic significance of PFKFB3. Further, we delved into the functional implications of PFKFB3 in modulating immune responses and biological processes within gastric cancer patients, as well as its broader relevance across multiple cancer types. Results underscore the potential of PFKFB3 as a prognostic biomarker and therapeutic target in gastric cancer. Our project can be found at https://github.com/PiPiNam/ML-GCP .

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Publication Details

Journal
Scientific Reports
Published
2025-03-13
DOI
https://doi.org/10.1038/s41598-025-93512-5
Citations
2
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
3.04

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article

Machine learning reveals glycolytic key gene in gastric cancer prognosis

Jin Hao, Qianyue Zhang, Nan Li, Ye Zhang et al.
2 citations
Scientific Reports
Ferroptosis and cancer prognosis
3.04
article

Machine learning reveals glycolytic key gene in gastric cancer prognosis

Jin Hao, Qianyue Zhang, Nan Li, Ye Zhang, Yuzhe Zhang, Mengfei Han, Jie Guo
article en
2 citations

Abstract

Glycolysis is recognized as a central metabolic pathway in the neoplastic evolution of gastric cancer, exerting profound effects on the tumor microenvironment and the neoplastic growth trajectory. However, the identification of key glycolytic genes that significantly affect gastric cancer prognosis remains underexplored. In this work, five machine-learning algorithms were used to elucidate the intimate association between the glycolysis-associated gene phosphofructokinase fructose-bisphosphate 3 (PFKFB3) and the prognosis of gastric cancer patients. Validation across multiple independent datasets confirmed the prognostic significance of PFKFB3. Further, we delved into the functional implications of PFKFB3 in modulating immune responses and biological processes within gastric cancer patients, as well as its broader relevance across multiple cancer types. Results underscore the potential of PFKFB3 as a prognostic biomarker and therapeutic target in gastric cancer. Our project can be found at https://github.com/PiPiNam/ML-GCP .

Scientific ReportsVol. 15(1)
China Academy of Information and Communications Technology (CN), First Hospital of China Medical University (CN), First Affiliated Hospital of Zhengzhou University (CN), China Medical University (CN)
National Natural Science Foundation of China
Good health and well-being
Openalex Percentile: Top 11%
Ferroptosis and cancer prognosis
3.04
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