Total Synthesis of the Membrane Spanning Tetraether Lipid brGDGT Ia and Elucidation of Its Stereochemical Configuration

Glycerol dialkyl glycerol tetraethers (GDGTs) are a group of membrane spanning lipids produced by both Archaea and Bacteria. Branched GDGTs (brGDGTs) are a class of these tetraether lipids known to be produced by certain bacteria and are commonly found in terrestrial environments. Due to their environmental ubiquity, high preservation potential, and role in membrane adaptation, brGDGTs form the basis of many widely employed paleoenvironmental proxies. The tetramethylated brGDGT Ia is the most commonly reported branched tetraether in cultured Acidobacteria and is a key component of brGDGT-based temperature indices. Herein, we report the first total synthesis of brGDGT Ia, thereby elucidating the relative configuration of the methyl branches as syn. We further demonstrate that VCD spectroscopy is a suitable tool to determine the absolute configuration of these cryptochiral compounds, a method waiting to be applied to the natural lipid, but currently hampered by its limited availability.

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Publication Details

Journal
Chemistry - A European Journal
Published
2025-03-12
DOI
https://doi.org/10.1002/chem.202500702
Citations
1
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
0.81

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article

Total Synthesis of the Membrane Spanning Tetraether Lipid brGDGT Ia and Elucidation of Its Stereochemical Configuration

Samarpita Mahapatra, Deborah A. Drost, Adriaan J. Minnaard, Christian Merten et al.
1 citations
Chemistry - A European Journal
Genomics and Phylogenetic Studies
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article

Total Synthesis of the Membrane Spanning Tetraether Lipid brGDGT Ia and Elucidation of Its Stereochemical Configuration

Samarpita Mahapatra, Deborah A. Drost, Adriaan J. Minnaard, Christian Merten, Sebastian Kopf, Toby Halamka
article en
1 citations

Abstract

Glycerol dialkyl glycerol tetraethers (GDGTs) are a group of membrane spanning lipids produced by both Archaea and Bacteria. Branched GDGTs (brGDGTs) are a class of these tetraether lipids known to be produced by certain bacteria and are commonly found in terrestrial environments. Due to their environmental ubiquity, high preservation potential, and role in membrane adaptation, brGDGTs form the basis of many widely employed paleoenvironmental proxies. The tetramethylated brGDGT Ia is the most commonly reported branched tetraether in cultured Acidobacteria and is a key component of brGDGT-based temperature indices. Herein, we report the first total synthesis of brGDGT Ia, thereby elucidating the relative configuration of the methyl branches as syn. We further demonstrate that VCD spectroscopy is a suitable tool to determine the absolute configuration of these cryptochiral compounds, a method waiting to be applied to the natural lipid, but currently hampered by its limited availability.

Chemistry - A European JournalVol. 31(25)
University of Groningen (NL), University of Colorado Boulder (US), University of Bristol (GB), Ruhr University Bochum (DE)
National Science Foundation, European Commission, Deutsche Forschungsgemeinschaft, Rijksuniversiteit Groningen, Université Côte d’Azur, University of Colorado Boulder
Life in Land
Openalex Percentile: Top 30%
Genomics and Phylogenetic Studies
0.81
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