Chromatin remodeling protein BPTF mediates chromatin accessibility at gene promoters in planarian stem cells

The S.mediterranea homolog of NuRF protein BPTF (SMED-BPTF) is essential for normal homeostasis in planarian tissues, potentially through its role in maintaining chromatin accessibility at a specific subset of gene promoters in planarian stem cells. By identifying loci that lose both chromatin accessibility and gene expression after depletion of BPTF, we have identified a cohort of genes that may have important functions in stem cell biology.

Authors

Institutions

Publication Details

Journal
BMC Genomics
Published
2025-03-11
DOI
https://doi.org/10.1186/s12864-025-11405-3
Citations
2
Primary Topic
Planarian Biology and Electrostimulation
Type
article
Field-Weighted Citation Impact
1.61

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Chromatin remodeling protein BPTF mediates chromatin accessibility at gene promoters in planarian stem cells

Prince Verma, John M. Allen, Alejandro Sánchez Alvarado, Elizabeth M. Duncan
2 citations
BMC Genomics
Planarian Biology and Electrostimulation
1.61
article

Chromatin remodeling protein BPTF mediates chromatin accessibility at gene promoters in planarian stem cells

Prince Verma, John M. Allen, Alejandro Sánchez Alvarado, Elizabeth M. Duncan
article en
2 citations

Abstract

The S.mediterranea homolog of NuRF protein BPTF (SMED-BPTF) is essential for normal homeostasis in planarian tissues, potentially through its role in maintaining chromatin accessibility at a specific subset of gene promoters in planarian stem cells. By identifying loci that lose both chromatin accessibility and gene expression after depletion of BPTF, we have identified a cohort of genes that may have important functions in stem cell biology.

BMC GenomicsVol. 26(1)
Stowers Institute for Medical Research (US), University of Kentucky (US)
National Institutes of Health
Zero hunger
Openalex Percentile: Top 19%
Planarian Biology and Electrostimulation
1.61
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.