Rosette Spectroscopic Imaging for Whole‐Brain Slab Metabolite Mapping at <scp>7T</scp>: Acceleration Potential and Reproducibility

Whole-brain proton magnetic resonance spectroscopic imaging (<sup>1</sup>H-MRSI) is a non-invasive technique for assessing neurochemical distribution in the brain, offering valuable insights into brain functions and neural diseases. It greatly benefits from the improved SNR at ultrahigh field strengths (≥ 7T). However, <sup>1</sup>H-MRSI still faces several challenges, such as long acquisition time and severe signal contamination from water and lipids. In this study, 2D and 3D short TR/TE <sup>1</sup>H-FID-MRSI sequences using rosette trajectories were developed with nominal spatial resolutions of 4.48 × 4.48 mm<sup>2</sup> and 4.48 × 4.48 × 4.50 mm<sup>3</sup>, respectively. Water signals were suppressed using an optimized Five-variable-Angle-gaussian-pulses-with-ShorT-total-duration (FAST) water suppression scheme of 76 ms, and lipid signals were removed using the L<sub>2</sub> regularization method. Metabolic maps of major <sup>1</sup>H metabolites were obtained in 5:40 min with 16 averages and 1 average for the 2D and 3D acquisitions, respectively. Excellent intra-session reproducibility was shown, with the coefficients of variance (CV) being lower than 6% for N-Acetyl-L-aspartic acid (NAA), Glutamate (Glu), total Choline (tCho), Creatine and Phosphocreatine (tCr), and Glycine and Myo-inositol (Gly + Ins). To explore the potential of further acceleration, compressed sensing was applied retrospectively to the 3D datasets. The structural similarity index (SSIM) remained above 0.85 and 0.8 until R = 2 and 3 for the metabolite maps of Glu, NAA, tCr, and tCho, indicating the possibility for further reduction of acquisition time to around 2 min.

Authors

Institutions

Publication Details

Journal
Human Brain Mapping
Published
2025-03-01
DOI
https://doi.org/10.1002/hbm.70176
Citations
3
Primary Topic
Advanced MRI Techniques and Applications
Type
article
Field-Weighted Citation Impact
4.08

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Rosette Spectroscopic Imaging for Whole‐Brain Slab Metabolite Mapping at 7T: Acceleration Potential and Reproducibility

Uzay E. Emir, Zhiwei Huang, Mark Widmaier, Ying Xiao et al.
3 citations
Human Brain Mapping
Advanced MRI Techniques and Applications
4.08
article

Rosette Spectroscopic Imaging for Whole‐Brain Slab Metabolite Mapping at 7T: Acceleration Potential and Reproducibility

Uzay E. Emir, Zhiwei Huang, Mark Widmaier, Ying Xiao, Lijing Xin, Antoine Klauser, André Döring
article en
3 citations

Abstract

Whole-brain proton magnetic resonance spectroscopic imaging (<sup>1</sup>H-MRSI) is a non-invasive technique for assessing neurochemical distribution in the brain, offering valuable insights into brain functions and neural diseases. It greatly benefits from the improved SNR at ultrahigh field strengths (≥ 7T). However, <sup>1</sup>H-MRSI still faces several challenges, such as long acquisition time and severe signal contamination from water and lipids. In this study, 2D and 3D short TR/TE <sup>1</sup>H-FID-MRSI sequences using rosette trajectories were developed with nominal spatial resolutions of 4.48 × 4.48 mm<sup>2</sup> and 4.48 × 4.48 × 4.50 mm<sup>3</sup>, respectively. Water signals were suppressed using an optimized Five-variable-Angle-gaussian-pulses-with-ShorT-total-duration (FAST) water suppression scheme of 76 ms, and lipid signals were removed using the L<sub>2</sub> regularization method. Metabolic maps of major <sup>1</sup>H metabolites were obtained in 5:40 min with 16 averages and 1 average for the 2D and 3D acquisitions, respectively. Excellent intra-session reproducibility was shown, with the coefficients of variance (CV) being lower than 6% for N-Acetyl-L-aspartic acid (NAA), Glutamate (Glu), total Choline (tCho), Creatine and Phosphocreatine (tCr), and Glycine and Myo-inositol (Gly + Ins). To explore the potential of further acceleration, compressed sensing was applied retrospectively to the 3D datasets. The structural similarity index (SSIM) remained above 0.85 and 0.8 until R = 2 and 3 for the metabolite maps of Glu, NAA, tCr, and tCho, indicating the possibility for further reduction of acquisition time to around 2 min.

Human Brain MappingVol. 46(4)
University of North Carolina at Chapel Hill (US), Centre d'Imagerie BioMedicale (CH), Siemens (Switzerland) (CH), École Polytechnique Fédérale de Lausanne (CH)
Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung
Clean water and sanitation
Openalex Percentile: Top 7%
Advanced MRI Techniques and Applications
4.08
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.