Christiangramia sediminicola sp. nov., a DNA-hydrolysing bacterium isolated from intertidal sediment

A Gram-stain-negative, yellow-pigmented, non-flagellated, motile by gliding, aerobic and rod-shaped bacterial strain, designated SM2212<sup>T</sup>, was isolated from intertidal sediment of Aoshan Bay in Qingdao, China. The strain grew at 5-35 °C and with 0.5-5.5% NaCl (w/v). It was able to reduce nitrate to nitrite and hydrolyse starch, gelatin and DNA. The phylogenetic trees based on the 16S rRNA genes and single-copy genes showed that strain SM2212<sup>T</sup> belonged to the genus <i>Christiangramia</i> within the family <i>Flavobacteriaceae</i>, sharing the highest 16S rRNA gene sequence similarity with the type strain of <i>Christiangramia echinicola</i> (97.1%) and 96.2-97.0% 16S rRNA gene sequence similarity with those of other known species in the genus. The major cellular fatty acids were summed feature 3 (C<sub>16:1</sub> <i>ω7с</i> and/or C<sub>16:1</sub> <i>ω6с</i>), iso-C<sub>15:0</sub>, iso-C<sub>17: 0</sub>3-OH, summed feature 9 (iso-C<sub>17:1</sub> <i> ω9c</i> and/or 10-methyl C<sub>16:0</sub>) and C<sub>16:0</sub>. The major polar lipids were phosphatidylethanolamine and an unidentified lipid. The genomic DNA G+C content of strain SM2212<sup>T</sup> was 37.0 mol%. The digital DNA-DNA hybridization and average nucleotide identity values between strain SM2212<sup>T</sup> and type strains of closely related known <i>Christiangramia</i> species were below 22.2 and 79.7%, respectively. Based on the polyphasic taxonomic analysis in this study, strain SM2212<sup>T</sup> is considered to represent a novel species in the genus <i>Christiangramia</i>, for which the name <i>Christiangramia sediminicola</i> is proposed. The type strain is SM2212<sup>T</sup> (=KCTC 92980<sup>T</sup>=MCCC 1K07684<sup>T</sup>).

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-03-05
DOI
https://doi.org/10.1099/ijsem.0.006703
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2
Primary Topic
Genomics and Phylogenetic Studies
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article
Field-Weighted Citation Impact
1.61
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article

Christiangramia sediminicola sp. nov., a DNA-hydrolysing bacterium isolated from intertidal sediment

Qi-Long Qin, Xiao‐Yan Song, Ping‐Yi Li, Xiu-Lan Chen et al.
2 citations
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
1.61
article

Christiangramia sediminicola sp. nov., a DNA-hydrolysing bacterium isolated from intertidal sediment

Qi-Long Qin, Xiao‐Yan Song, Ping‐Yi Li, Xiu-Lan Chen, Ning-Hua Liu, Jing Wang, Jiaxuan Wang, Yu‐Zhong Zhang, Xi‐Ying Zhang
article en
2 citations

Abstract

A Gram-stain-negative, yellow-pigmented, non-flagellated, motile by gliding, aerobic and rod-shaped bacterial strain, designated SM2212<sup>T</sup>, was isolated from intertidal sediment of Aoshan Bay in Qingdao, China. The strain grew at 5-35 °C and with 0.5-5.5% NaCl (w/v). It was able to reduce nitrate to nitrite and hydrolyse starch, gelatin and DNA. The phylogenetic trees based on the 16S rRNA genes and single-copy genes showed that strain SM2212<sup>T</sup> belonged to the genus <i>Christiangramia</i> within the family <i>Flavobacteriaceae</i>, sharing the highest 16S rRNA gene sequence similarity with the type strain of <i>Christiangramia echinicola</i> (97.1%) and 96.2-97.0% 16S rRNA gene sequence similarity with those of other known species in the genus. The major cellular fatty acids were summed feature 3 (C<sub>16:1</sub> <i>ω7с</i> and/or C<sub>16:1</sub> <i>ω6с</i>), iso-C<sub>15:0</sub>, iso-C<sub>17: 0</sub>3-OH, summed feature 9 (iso-C<sub>17:1</sub> <i> ω9c</i> and/or 10-methyl C<sub>16:0</sub>) and C<sub>16:0</sub>. The major polar lipids were phosphatidylethanolamine and an unidentified lipid. The genomic DNA G+C content of strain SM2212<sup>T</sup> was 37.0 mol%. The digital DNA-DNA hybridization and average nucleotide identity values between strain SM2212<sup>T</sup> and type strains of closely related known <i>Christiangramia</i> species were below 22.2 and 79.7%, respectively. Based on the polyphasic taxonomic analysis in this study, strain SM2212<sup>T</sup> is considered to represent a novel species in the genus <i>Christiangramia</i>, for which the name <i>Christiangramia sediminicola</i> is proposed. The type strain is SM2212<sup>T</sup> (=KCTC 92980<sup>T</sup>=MCCC 1K07684<sup>T</sup>).

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(3)
Shandong University (CN), Qingdao National Laboratory for Marine Science and Technology (CN), Ocean University of China (CN)
Openalex Percentile: Top 19%
Genomics and Phylogenetic Studies
1.61
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