Differentiation and response mechanisms of the endophytic flora of plants ecologically restored in the ilmenite area

Heavy metal contamination in soil is a serious environmental challenge, and abandoned mining areas are of particular concern. In order to rehabilitate the ecology of these areas. In this study, we used ICP-MS and potentiometric method to analyze the soil physicochemical and then endophytic bacteria of remediation plants with the help of 16sRNA sequencing, in order to investigate the ecological remediation of abandoned ilmenite mine and the effect of soil microbiology by seven common plants. The results revealed that the abandonment of ilmenite significantly increased the contents of total phosphorus, total potassium, available potassium, iron, and lead in the surrounding soils. It also affected the richness and diversity of endophytic bacterial communities. Pvi had the highest richness, while Tsi had the lowest richness (<i>P</i> < 0.05). A total of 28 phyla, 69 classes, 171 orders, and 521 genera were identified. A total of nine core OTUs were found: <i>Stenotrophomonas</i>, <i>Chryseobacterium</i>, <i>Lactobacillus</i>, <i>Clostridium_sensu_stricto_12</i>, <i>Prevotella</i>, <i>Lactobacillus</i>, <i>Bradyrhizobium</i>, <i>Nocardioides</i>, and <i>Delftia</i>. Beta diversity analysis revealed that the community structure of the endophytic bacteria differed during the remediation process at the ilmenite site. Functional prediction revealed upregulation of Dco transporter protein function, DNA-binding transcriptional regulators, glyoxalase or related metal-dependent hydrolases, acyl coenzyme A synthetases, ATPase components, amino acid synthesis, and cellular respiration-related functions. Pearson correlation analysis revealed that the SOC, TK, AN, AK, and Zn contents were significantly correlated with α diversity. Redundancy analysis (RDA) revealed that Actinobacteriota was significantly positively correlated with soil SOD, AN, TN, and TK contents. For the first time, this study revealed the interactions among plants, endophytic bacteria and soil pollutants, laying a theoretical basis for screening specific plant endophytic bacteria for ecological restoration.

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Publication Details

Journal
Frontiers in Microbiology
Published
2025-03-07
DOI
https://doi.org/10.3389/fmicb.2025.1555309
Citations
1
Primary Topic
Microbial Community Ecology and Physiology
Type
article
Field-Weighted Citation Impact
1.72
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article

Differentiation and response mechanisms of the endophytic flora of plants ecologically restored in the ilmenite area

Peng Wu, Qiang Li, Yunfeng Zhang, Junqiang Xu et al.
1 citations
Frontiers in Microbiology
Microbial Community Ecology and Physiology
1.72
article

Differentiation and response mechanisms of the endophytic flora of plants ecologically restored in the ilmenite area

Peng Wu, Qiang Li, Yunfeng Zhang, Junqiang Xu, Xin Yu, Zhonghua Zou
article en
1 citations

Abstract

Heavy metal contamination in soil is a serious environmental challenge, and abandoned mining areas are of particular concern. In order to rehabilitate the ecology of these areas. In this study, we used ICP-MS and potentiometric method to analyze the soil physicochemical and then endophytic bacteria of remediation plants with the help of 16sRNA sequencing, in order to investigate the ecological remediation of abandoned ilmenite mine and the effect of soil microbiology by seven common plants. The results revealed that the abandonment of ilmenite significantly increased the contents of total phosphorus, total potassium, available potassium, iron, and lead in the surrounding soils. It also affected the richness and diversity of endophytic bacterial communities. Pvi had the highest richness, while Tsi had the lowest richness (<i>P</i> < 0.05). A total of 28 phyla, 69 classes, 171 orders, and 521 genera were identified. A total of nine core OTUs were found: <i>Stenotrophomonas</i>, <i>Chryseobacterium</i>, <i>Lactobacillus</i>, <i>Clostridium_sensu_stricto_12</i>, <i>Prevotella</i>, <i>Lactobacillus</i>, <i>Bradyrhizobium</i>, <i>Nocardioides</i>, and <i>Delftia</i>. Beta diversity analysis revealed that the community structure of the endophytic bacteria differed during the remediation process at the ilmenite site. Functional prediction revealed upregulation of Dco transporter protein function, DNA-binding transcriptional regulators, glyoxalase or related metal-dependent hydrolases, acyl coenzyme A synthetases, ATPase components, amino acid synthesis, and cellular respiration-related functions. Pearson correlation analysis revealed that the SOC, TK, AN, AK, and Zn contents were significantly correlated with α diversity. Redundancy analysis (RDA) revealed that Actinobacteriota was significantly positively correlated with soil SOD, AN, TN, and TK contents. For the first time, this study revealed the interactions among plants, endophytic bacteria and soil pollutants, laying a theoretical basis for screening specific plant endophytic bacteria for ecological restoration.

Frontiers in MicrobiologyVol. 16
Yunnan Agricultural University (CN), Chengdu University (CN), Ministry of Agriculture and Rural Affairs (CN)
Life in Land
Openalex Percentile: Top 19%
Microbial Community Ecology and Physiology
1.72
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