On-the-Fly Improving Segment Anything for Medical Image Segmentation Using Auxiliary Online Learning

The current variants of the Segment Anything Model (SAM), which include the original SAM and Medical SAM, still lack the capability to produce sufficiently accurate segmentation for medical images. In medical imaging contexts, it is not uncommon for human experts to rectify segmentations of specific test samples after SAM generates its segmentation predictions. These rectifications typically entail manual or semi-manual corrections employing state-of-the-art annotation tools. Motivated by this process, we introduce a novel approach that leverages the advantages of online machine learning to enhance Segment Anything (SA) during test time. We employ rectified annotations to perform online learning, with the aim of improving the segmentation quality of SA on medical images. To ensure the effectiveness and efficiency of online learning when integrated with large-scale vision models like SAM, we propose a new method called Auxiliary Online Learning (AuxOL), which entails adaptive online-batch and adaptive segmentation fusion. Experiments conducted on eight datasets covering four medical imaging modalities validate the effectiveness of the proposed method. Our work proposes and validates a new, practical, and effective approach for enhancing SA on downstream segmentation tasks (e.g., medical image segmentation). The code is publicly available at https://sam-auxol.github.io/AuxOL/.

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Publication Details

Journal
IEEE Transactions on Medical Imaging
Published
2025-03-07
DOI
https://doi.org/10.1109/tmi.2025.3548985
Primary Topic
Brain Tumor Detection and Classification
Type
article
Field-Weighted Citation Impact
0.00

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article

On-the-Fly Improving Segment Anything for Medical Image Segmentation Using Auxiliary Online Learning

Yizhe Zhang, Weidi Xie, Qi Dou, Shuo Wang et al.
IEEE Transactions on Medical Imaging
Brain Tumor Detection and Classification
article

On-the-Fly Improving Segment Anything for Medical Image Segmentation Using Auxiliary Online Learning

Yizhe Zhang, Weidi Xie, Qi Dou, Shuo Wang, Tao Zhou, Tianyu Huang
article en

Abstract

The current variants of the Segment Anything Model (SAM), which include the original SAM and Medical SAM, still lack the capability to produce sufficiently accurate segmentation for medical images. In medical imaging contexts, it is not uncommon for human experts to rectify segmentations of specific test samples after SAM generates its segmentation predictions. These rectifications typically entail manual or semi-manual corrections employing state-of-the-art annotation tools. Motivated by this process, we introduce a novel approach that leverages the advantages of online machine learning to enhance Segment Anything (SA) during test time. We employ rectified annotations to perform online learning, with the aim of improving the segmentation quality of SA on medical images. To ensure the effectiveness and efficiency of online learning when integrated with large-scale vision models like SAM, we propose a new method called Auxiliary Online Learning (AuxOL), which entails adaptive online-batch and adaptive segmentation fusion. Experiments conducted on eight datasets covering four medical imaging modalities validate the effectiveness of the proposed method. Our work proposes and validates a new, practical, and effective approach for enhancing SA on downstream segmentation tasks (e.g., medical image segmentation). The code is publicly available at https://sam-auxol.github.io/AuxOL/.

IEEE Transactions on Medical ImagingVol. 44(10)
Fujian Medical University (CN), Shanghai Medical College of Fudan University (CN), Chinese University of Hong Kong (HK), Shanghai Jiao Tong University (CN), Fudan University (CN), Nanjing University of Science and Technology (CN), Shandong Jiaotong University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Jiangsu Province
Openalex Percentile: Top 94%
Brain Tumor Detection and Classification
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