Extensive <i>In-silico</i> Target-Ligand Conformational Space Sampling of Garlic-Derived Sulfur Compounds Targeting COVID-19 Infection

The still ongoing search for effective antiviral agents against SARS-CoV-2 has led researchers to explore natural products for potential therapeutic candidates. In this work, we conducted a comprehensive high-throughput virtual screening and molecular docking analysis of twenty-six garlic-derived sulfur-containing compounds against several key viral and host targets selected because of their relevance in the SARS-CoV-2 infection cycle. We studied the binding interactions of these compounds with targets including the viral Spike complex, Mpro and PLpro and cell’s ACE2, TMPRSS2 and Cathepsin B. Our analysis revealed that compounds [Formula: see text]-glutamyl-S-t-1-propenylcysteine, [Formula: see text]-glutamyl-S-allylcysteine, cycloalliin and carvone, exhibited the most promising binding affinities, hence act as potential inhibitors by interfering the viral entry and replication processes. Notably, they also demonstrated strong binding at the RBD-ACE2 interface, suggesting their capacity to block the initial viral attachment and entry. These findings highlight the potential of garlic-derived compounds as multi-target antiviral agents, warranting further experimental validation to confirm their efficacy and explore their therapeutic potential against COVID-19.

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Publication Details

Journal
Journal of Computational Biophysics and Chemistry
Published
2025-03-07
DOI
https://doi.org/10.1142/s2737416525500267
Primary Topic
Garlic and Onion Studies
Type
article
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article

Extensive In-silico Target-Ligand Conformational Space Sampling of Garlic-Derived Sulfur Compounds Targeting COVID-19 Infection

Mariana Andrade-Medina, Aldo Herrera-Rodulfo, Mauricio Carrillo‐Tripp, M. García‐Delgado
Journal of Computational Biophysics and Chemistry
Garlic and Onion Studies
article

Extensive In-silico Target-Ligand Conformational Space Sampling of Garlic-Derived Sulfur Compounds Targeting COVID-19 Infection

Mariana Andrade-Medina, Aldo Herrera-Rodulfo, Mauricio Carrillo‐Tripp, M. García‐Delgado
article en

Abstract

The still ongoing search for effective antiviral agents against SARS-CoV-2 has led researchers to explore natural products for potential therapeutic candidates. In this work, we conducted a comprehensive high-throughput virtual screening and molecular docking analysis of twenty-six garlic-derived sulfur-containing compounds against several key viral and host targets selected because of their relevance in the SARS-CoV-2 infection cycle. We studied the binding interactions of these compounds with targets including the viral Spike complex, Mpro and PLpro and cell’s ACE2, TMPRSS2 and Cathepsin B. Our analysis revealed that compounds [Formula: see text]-glutamyl-S-t-1-propenylcysteine, [Formula: see text]-glutamyl-S-allylcysteine, cycloalliin and carvone, exhibited the most promising binding affinities, hence act as potential inhibitors by interfering the viral entry and replication processes. Notably, they also demonstrated strong binding at the RBD-ACE2 interface, suggesting their capacity to block the initial viral attachment and entry. These findings highlight the potential of garlic-derived compounds as multi-target antiviral agents, warranting further experimental validation to confirm their efficacy and explore their therapeutic potential against COVID-19.

Journal of Computational Biophysics and ChemistryVol. 25(07)
Centro de Investigación en Materiales Avanzados (MX), Instituto Politécnico Nacional (MX)
Zero hunger
Openalex Percentile: Top 97%
Garlic and Onion Studies
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Extensive <i>In-silico</i> Target-Ligand Conformational Space Sampling of Garlic-Derived Sulfur Compounds Targeting COVID-19 Infection — Mariana Andrade-Medina, Aldo Herrera-Rodulfo, et al. · Journal of Computational Biophysics and Chemistry (2025) | TGRS Research Map | TGRS