Identification and expression responses of TCP gene family in Opisthopappus taihangensis under abiotic stress

The TCP gene family plays pivotal roles in the development and abiotic stress responses of plants; however, no data has been provided for this gene family in <i>Opisthopappus taihangensis</i>. Based on <i>O. taihangensis</i> genome, 14 <i>TCP</i> genes were identified and divided into two classes (I and II). After tandem and segmental duplication/whole-genome duplication (WGD), more loss and less gain events of OtTCPs occurred, which might be related with the underwent purifying selection during the evolution. The conserved motifs and structures of <i>OtTCP</i> genes contained light response, growth and development, hormone response, and stress-related cis-acting elements. Different <i>OtTCP</i> genes, even duplicated gene pairs, could be expressed in different tissues, which implied that <i>OtTCP</i> genes had diverse function. Among OtTCPs, <i>OtTCP4</i>, <i>9</i> and <i>11</i> of CYC clade (Class II) presented a relative wide expression pattern with no or one intron. The three <i>TCP</i> genes could be regarded as important candidate factors for <i>O. taihangensis</i> in growth, development and stress response. These results provided some clues and references for the further in-depth exploration of <i>O. taihangensis</i> resistance mechanisms, as well as those of other unique eco-environment plants.

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Publication Details

Journal
Frontiers in Plant Science
Published
2025-03-06
DOI
https://doi.org/10.3389/fpls.2025.1499244
Citations
2
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
3.50

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article

Identification and expression responses of TCP gene family in Opisthopappus taihangensis under abiotic stress

Xiaojuan Zhou, Tingyu Wang, Dan Huang, Li Liu et al.
2 citations
Frontiers in Plant Science
Plant Molecular Biology Research
3.50
article

Identification and expression responses of TCP gene family in Opisthopappus taihangensis under abiotic stress

Xiaojuan Zhou, Tingyu Wang, Dan Huang, Li Liu, Yuexin Shen, Yiling Wang, Yimeng Zhang, Ting Gao, Qi Wu, Hang Ye, Mian Han, Min Chai
article en
2 citations

Abstract

The TCP gene family plays pivotal roles in the development and abiotic stress responses of plants; however, no data has been provided for this gene family in <i>Opisthopappus taihangensis</i>. Based on <i>O. taihangensis</i> genome, 14 <i>TCP</i> genes were identified and divided into two classes (I and II). After tandem and segmental duplication/whole-genome duplication (WGD), more loss and less gain events of OtTCPs occurred, which might be related with the underwent purifying selection during the evolution. The conserved motifs and structures of <i>OtTCP</i> genes contained light response, growth and development, hormone response, and stress-related cis-acting elements. Different <i>OtTCP</i> genes, even duplicated gene pairs, could be expressed in different tissues, which implied that <i>OtTCP</i> genes had diverse function. Among OtTCPs, <i>OtTCP4</i>, <i>9</i> and <i>11</i> of CYC clade (Class II) presented a relative wide expression pattern with no or one intron. The three <i>TCP</i> genes could be regarded as important candidate factors for <i>O. taihangensis</i> in growth, development and stress response. These results provided some clues and references for the further in-depth exploration of <i>O. taihangensis</i> resistance mechanisms, as well as those of other unique eco-environment plants.

Frontiers in Plant ScienceVol. 16
Ministry of Education of the People's Republic of China (CN), Northwest University (CN), Shanxi Normal University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 9%
Plant Molecular Biology Research
3.50
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