Nano calcium zincate-assisted synthesis of benzo[ <i>d</i> ]thiazol-2-yl phenylisoxazoles: quantum computational, <i>in silico</i> molecular docking simulations and DNA interaction

This study introduces a new and simple method for the synthesis of a series of 3-(benzo[<i>d</i>]thiazol-2-yl)-5-phenylisoxazole derivatives 3(a-f), and examines its potential interactions with DNA. The synthesis includes the reaction of 2-aminobenzenethiol (1) with a variety of substituted 5-phenylisoxazole-3-carbaldehydes 2(a-f) in the presence of a cost-effective and reusable nanocatalyst, Calcium-Zincate (CaZnO<sub>2</sub>). The CaZnO<sub>2</sub> catalyst showed a consistent and long-lasting catalytic activity over several reaction cycles and retained its unique heterogeneous properties. The resulting compounds were characterized in detail using various spectroscopic and analytical techniques in order to confirm their structures. In addition, the interaction of these synthesized compounds with calf thymus-DNA (CT-DNA) using absorption spectroscopy and viscosity measurements was assessed. <i>In silico</i> docking studies were performed to predict their binding affinity with human DNA (PDB ID: 1G3X). The compounds were further analyzed using the Density Functional Theory (DFT) with the B3LYP functional and the 6-31 G(d) basis set in chloroform, with the results aligning closely with the experimental findings. Furthermore, the compounds ability to cleave PUC19 DNA was assessed, along with their photoinduced nuclease activity under UV-visible light, confirmed by photo-induced cleavage assays.

Authors

Institutions

Publication Details

Journal
Nucleosides Nucleotides & Nucleic Acids
Published
2025-03-06
DOI
https://doi.org/10.1080/15257770.2025.2473442
Primary Topic
Synthesis and biological activity
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Nano calcium zincate-assisted synthesis of benzo[ d ]thiazol-2-yl phenylisoxazoles: quantum computational, in silico molecular docking simulations and DNA interaction

Yogendra Kambalagere, A. H. Shridhar, N. Madhusudhana, B. Vinay Kumar et al.
Nucleosides Nucleotides & Nucleic Acids
Synthesis and biological activity
article

Nano calcium zincate-assisted synthesis of benzo[ d ]thiazol-2-yl phenylisoxazoles: quantum computational, in silico molecular docking simulations and DNA interaction

Yogendra Kambalagere, A. H. Shridhar, N. Madhusudhana, B. Vinay Kumar, V. Srinivasa Murthy, Lohit Naik, M. Sennappan, A. K. Smitha
article en

Abstract

This study introduces a new and simple method for the synthesis of a series of 3-(benzo[<i>d</i>]thiazol-2-yl)-5-phenylisoxazole derivatives 3(a-f), and examines its potential interactions with DNA. The synthesis includes the reaction of 2-aminobenzenethiol (1) with a variety of substituted 5-phenylisoxazole-3-carbaldehydes 2(a-f) in the presence of a cost-effective and reusable nanocatalyst, Calcium-Zincate (CaZnO<sub>2</sub>). The CaZnO<sub>2</sub> catalyst showed a consistent and long-lasting catalytic activity over several reaction cycles and retained its unique heterogeneous properties. The resulting compounds were characterized in detail using various spectroscopic and analytical techniques in order to confirm their structures. In addition, the interaction of these synthesized compounds with calf thymus-DNA (CT-DNA) using absorption spectroscopy and viscosity measurements was assessed. <i>In silico</i> docking studies were performed to predict their binding affinity with human DNA (PDB ID: 1G3X). The compounds were further analyzed using the Density Functional Theory (DFT) with the B3LYP functional and the 6-31 G(d) basis set in chloroform, with the results aligning closely with the experimental findings. Furthermore, the compounds ability to cleave PUC19 DNA was assessed, along with their photoinduced nuclease activity under UV-visible light, confirmed by photo-induced cleavage assays.

Nucleosides Nucleotides & Nucleic AcidsVol. 45(3)
Kuvempu University (IN), G.S. Science, Arts And Commerce College (IN), Dayananda Sagar University (IN), Dr. Hari Singh Gour University (IN)
Openalex Percentile: Top 97%
Synthesis and biological activity
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.