Advancing open and reproducible water data science by integrating data analytics with an online data repository

Scientific and management challenges in the water domain require synthesis of diverse data. Many analysis tasks are difficult because datasets are large and complex, standard formats are not always agreed upon or mapped to efficient data structures, scientists may lack training for tackling large and complex datasets, and it can be difficult to share and reproduce data science workflows. Overcoming barriers to accessing, organizing, and preparing datasets for analyses can transform how water scientists work. Building on the HydroShare repository’s cyberinfrastructure, we created a Python package that automates data retrieval, organization, and curation for analysis, reducing time spent in choosing appropriate data structures and writing data ingestion code. It manages metadata and automates data loading into performant structures consistent with Python’s visualization, analysis, and data science capabilities and can be used to build and share more reproducible scientific workflows in HydroShare following FAIR (Findable, Accessible, Interoperable, and Reusable) principles. • The hsclient python client library was created for the HydroShare repository. • hsclient automates data retrieval, organization, and curation for analysis. • Integrating hsclient with performant data structures speeds time to analysis. • hsclient enables building and sharing more reproducible scientific workflows. • hsclient can be used in any Python environment, including online JupyterHubs.

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Publication Details

Journal
Environmental Modelling & Software
Published
2025-03-06
DOI
https://doi.org/10.1016/j.envsoft.2025.106422
Citations
1
Primary Topic
Environmental Monitoring and Data Management
Type
article
Field-Weighted Citation Impact
2.35

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article

Advancing open and reproducible water data science by integrating data analytics with an online data repository

Anthony M. Castronova, Jeffery S. Horsburgh, Scott Black, Pabitra Dash
1 citations
Environmental Modelling & Software
Environmental Monitoring and Data Management
2.35
article

Advancing open and reproducible water data science by integrating data analytics with an online data repository

Anthony M. Castronova, Jeffery S. Horsburgh, Scott Black, Pabitra Dash
article en
1 citations

Abstract

Scientific and management challenges in the water domain require synthesis of diverse data. Many analysis tasks are difficult because datasets are large and complex, standard formats are not always agreed upon or mapped to efficient data structures, scientists may lack training for tackling large and complex datasets, and it can be difficult to share and reproduce data science workflows. Overcoming barriers to accessing, organizing, and preparing datasets for analyses can transform how water scientists work. Building on the HydroShare repository’s cyberinfrastructure, we created a Python package that automates data retrieval, organization, and curation for analysis, reducing time spent in choosing appropriate data structures and writing data ingestion code. It manages metadata and automates data loading into performant structures consistent with Python’s visualization, analysis, and data science capabilities and can be used to build and share more reproducible scientific workflows in HydroShare following FAIR (Findable, Accessible, Interoperable, and Reusable) principles. • The hsclient python client library was created for the HydroShare repository. • hsclient automates data retrieval, organization, and curation for analysis. • Integrating hsclient with performant data structures speeds time to analysis. • hsclient enables building and sharing more reproducible scientific workflows. • hsclient can be used in any Python environment, including online JupyterHubs.

Environmental Modelling & SoftwareVol. 188
Utah State University (US), Consortium of Universities for the Advancement of Hydrologic Science (US)
National Science Foundation
Clean water and sanitation
Openalex Percentile: Top 15%
Environmental Monitoring and Data Management
2.35
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Advancing open and reproducible water data science by integrating data analytics with an online data repository — Anthony M. Castronova, Jeffery S. Horsburgh, et al. · Environmental Modelling & Software (2025) | TGRS Research Map | TGRS