Systematic Literature Review on Metaheuristic Algorithms in SNP Analysis for Diseases

Single-nucleotide polymorphism (SNP) analysis has become a pivotal strategy for drug discovery within bioinformatics, especially for incurable diseases like cancer. With the increasing number of researchers starting to embrace metaheuristic methods, a review was done by gathering papers from the Google Scholar database from 2018 to 2023, which resulted in 20 papers after title, abstract, and content filtering. The findings show that the Genetic Algorithm and the Harmony Search Algorithm have become popular approaches in SNP analysis, particularly in studies on breast cancer, age-related macular degeneration, and colorectal cancer. However, the review shows that while researchers have proven most methods effective in finding disease-related SNPs, a more measurable study in SNP analysis is needed, due to the lack of elaboration on measurement metrics in the found studies.

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Published
2024-11-29
DOI
https://doi.org/10.1109/icoris63540.2024.10903849
Citations
1
Primary Topic
Machine Learning in Bioinformatics
Type
article
Field-Weighted Citation Impact
0.23
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Systematic Literature Review on Metaheuristic Algorithms in SNP Analysis for Diseases

Kuncahyo Setyo Nugroho, Jason Sebastian Sulistyawan, Bens Pardamean
1 citations
Machine Learning in Bioinformatics
0.23
article

Systematic Literature Review on Metaheuristic Algorithms in SNP Analysis for Diseases

Kuncahyo Setyo Nugroho, Jason Sebastian Sulistyawan, Bens Pardamean
article en
1 citations

Abstract

Single-nucleotide polymorphism (SNP) analysis has become a pivotal strategy for drug discovery within bioinformatics, especially for incurable diseases like cancer. With the increasing number of researchers starting to embrace metaheuristic methods, a review was done by gathering papers from the Google Scholar database from 2018 to 2023, which resulted in 20 papers after title, abstract, and content filtering. The findings show that the Genetic Algorithm and the Harmony Search Algorithm have become popular approaches in SNP analysis, particularly in studies on breast cancer, age-related macular degeneration, and colorectal cancer. However, the review shows that while researchers have proven most methods effective in finding disease-related SNPs, a more measurable study in SNP analysis is needed, due to the lack of elaboration on measurement metrics in the found studies.

Binus University (ID)
Openalex Percentile: Top 39%
Machine Learning in Bioinformatics
0.23
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