Selection of Sclerodermus pupariae Reference Genes for Quantitative Real-Time PCR

<i>S. pupariae</i> is a newly discovered species of parasitoid wasps. Research into its development, behavioral genetics, and molecular mechanisms provides valuable insights for improving integrated pest management strategies. Quantitative real-time PCR (qRT-PCR) is the most commonly used method for analyzing gene expression. This method requires the identification of stable reference genes to accurately evaluate transcriptional level variations. In this study, eight candidate reference genes (<i>TUB</i>, <i>TBP</i>, <i>RPS18</i>, <i>GAPDH</i>, <i>18S rRNA</i>, <i>RPL32</i>, <i>Actin</i>, and <i>EF1-α</i>) were identified and evaluated for their suitability as reference genes. Gene expression levels across different developmental stages were analyzed using three software tools, GeNorm, NormFinder, and BestKeeper, and the online tool RefFinder. The overall ranking of reference gene stability was as follows: <i>RPS18</i> > <i>18S rRNA</i> > <i>RPL32</i> > <i>GAPDH</i> > <i>Actin</i> > <i>TUB</i> > <i>TPB</i> > <i>EF1-α</i>. Ultimately, <i>RPS18</i> was determined to be the most stable reference gene.

Authors

Institutions

Publication Details

Journal
Insects
Published
2025-03-04
DOI
https://doi.org/10.3390/insects16030268
Primary Topic
Molecular Biology Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Selection of Sclerodermus pupariae Reference Genes for Quantitative Real-Time PCR

Xiaolin Dong, Ting Zhou, Jie Zhang, Tang YanLong et al.
Insects
Molecular Biology Techniques and Applications
article

Selection of Sclerodermus pupariae Reference Genes for Quantitative Real-Time PCR

Xiaolin Dong, Ting Zhou, Jie Zhang, Tang YanLong, Huahua Feng, Kui Dong Kang
article en

Abstract

<i>S. pupariae</i> is a newly discovered species of parasitoid wasps. Research into its development, behavioral genetics, and molecular mechanisms provides valuable insights for improving integrated pest management strategies. Quantitative real-time PCR (qRT-PCR) is the most commonly used method for analyzing gene expression. This method requires the identification of stable reference genes to accurately evaluate transcriptional level variations. In this study, eight candidate reference genes (<i>TUB</i>, <i>TBP</i>, <i>RPS18</i>, <i>GAPDH</i>, <i>18S rRNA</i>, <i>RPL32</i>, <i>Actin</i>, and <i>EF1-α</i>) were identified and evaluated for their suitability as reference genes. Gene expression levels across different developmental stages were analyzed using three software tools, GeNorm, NormFinder, and BestKeeper, and the online tool RefFinder. The overall ranking of reference gene stability was as follows: <i>RPS18</i> > <i>18S rRNA</i> > <i>RPL32</i> > <i>GAPDH</i> > <i>Actin</i> > <i>TUB</i> > <i>TPB</i> > <i>EF1-α</i>. Ultimately, <i>RPS18</i> was determined to be the most stable reference gene.

InsectsVol. 16(3)
Hubei University of Medicine (CN), Yangtze University (CN), Zunyi Normal College (CN)
National Natural Science Foundation of China
Zero hunger
Openalex Percentile: Top 96%
Molecular Biology Techniques and Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.