Whole-Exome Sequencing Followed by dPCR-Based Personalized Genetic Approach in Solid Organ Transplantation: A Study Protocol and Preliminary Results

Genetic profiling and molecular biology methods have made it possible to study the etiology of the end-stage organ disease that led to transplantation, the genetic factors of compatibility and tolerance of the transplant, and the pharmacogenetics of immunosuppressive drugs and allowed for the development of monitoring methods for the early assessment of allograft rejection. This study aims to report the design and baseline characteristics of an integrated personalized genetic approach in solid organ transplantation, including whole-exome sequencing (WES) and the monitoring of dd-cfDNA by dPCR. Preliminary results reported female recipients with male donors undergoing two pediatric and five adult kidney and three heart transplantations. WES revealed a pathogenic mutation in <i>RBM20</i> and VUS in <i>TTN</i> and <i>PKP2</i> in heart recipients, while kidney donors presented mutations in <i>UMOD</i> and <i>APOL1</i> associated with autosomal-dominant kidney diseases, highlighting the risks requiring the long-term monitoring of recipients, donors, and their family members. %dd-cfDNA levels were generally stable but elevated in cadaveric kidney recipient and one pediatric patient with infectious complications and genetic variants in the <i>ABCB1</i> and <i>ABCC2</i> genes. These findings highlight the potential of combining genetic and molecular biomarker-based approaches to improve donor-recipient matching, predict complications, and personalize post-transplant care, paving the way for precision medicine in transplantation.

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Publication Details

Journal
Methods and Protocols
Published
2025-03-04
DOI
https://doi.org/10.3390/mps8020027
Citations
3
Primary Topic
Renal Transplantation Outcomes and Treatments
Type
article
Field-Weighted Citation Impact
5.96
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Whole-Exome Sequencing Followed by dPCR-Based Personalized Genetic Approach in Solid Organ Transplantation: A Study Protocol and Preliminary Results

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3 citations
Methods and Protocols
Renal Transplantation Outcomes and Treatments
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article

Whole-Exome Sequencing Followed by dPCR-Based Personalized Genetic Approach in Solid Organ Transplantation: A Study Protocol and Preliminary Results

Mirgul Bayanova, Svetlana Novikova, Gulzhan Myrzakhmetova, Yuriy Pya, Lyazzat Nazarova, Aida Turganbekova, Aidos Bolatov, Aida Zhenissova, Aizhan Abdikadirova, Dias Malik, Malika Sapargaliyeva
article en
3 citations

Abstract

Genetic profiling and molecular biology methods have made it possible to study the etiology of the end-stage organ disease that led to transplantation, the genetic factors of compatibility and tolerance of the transplant, and the pharmacogenetics of immunosuppressive drugs and allowed for the development of monitoring methods for the early assessment of allograft rejection. This study aims to report the design and baseline characteristics of an integrated personalized genetic approach in solid organ transplantation, including whole-exome sequencing (WES) and the monitoring of dd-cfDNA by dPCR. Preliminary results reported female recipients with male donors undergoing two pediatric and five adult kidney and three heart transplantations. WES revealed a pathogenic mutation in <i>RBM20</i> and VUS in <i>TTN</i> and <i>PKP2</i> in heart recipients, while kidney donors presented mutations in <i>UMOD</i> and <i>APOL1</i> associated with autosomal-dominant kidney diseases, highlighting the risks requiring the long-term monitoring of recipients, donors, and their family members. %dd-cfDNA levels were generally stable but elevated in cadaveric kidney recipient and one pediatric patient with infectious complications and genetic variants in the <i>ABCB1</i> and <i>ABCC2</i> genes. These findings highlight the potential of combining genetic and molecular biomarker-based approaches to improve donor-recipient matching, predict complications, and personalize post-transplant care, paving the way for precision medicine in transplantation.

Methods and ProtocolsVol. 8(2)
Shenzhen University (CN), Astana Medical University (KZ)
Openalex Percentile: Top 5%
Renal Transplantation Outcomes and Treatments
5.96
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