Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for <i>anti</i> ‐ and <i>syn</i> ‐Selective Epoxidations of <i>α</i> , <i>β</i> ‐Unsaturated Aldehydes

Abstract The enzyme 2‐deoxy‐D‐ribose‐5‐phosphate aldolase (DERA) naturally catalyzes the reversible aldol addition between acetaldehyde and D‐glyceraldehyde‐3‐phosphate to yield 2‐deoxy‐D‐ribose‐5‐phosphate. Herein we describe the redesign of DERA into a proficient non‐natural peroxygenase that promotes the asymmetric epoxidation of various α , β ‐unsaturated aldehydes. This repurposed aldolase, named DERA‐EP, is able to utilize H 2 O 2 to accomplish both anti ‐ and syn ‐selective epoxidations of various α , β ‐unsaturated aldehydes to give the corresponding epoxides with moderate to high diastereoselectivity (diastereomeric ratio up to 99 : 1) and excellent enantioselectivity (enantiomeric ratio up to 99 : 1). Crystallographic analysis of DERA‐EP in a substrate‐free and substrate‐bound state provides a structural context for the evolved activity, a clear explanation for the high enantioselectivity, and compelling evidence for catalysis via enzyme‐bound iminium ion intermediates. The unprecedented anti ‐selectivity of DERA‐EP with multiple α , β ‐unsaturated aldehydes is complementary to the syn ‐selectivity of previously reported enzyme‐, metal‐ and organo‐catalysts, making DERA‐EP an attractive new asset to the toolbox of epoxidation catalysts.

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Publication Details

Journal
Angewandte Chemie
Published
2025-03-02
DOI
https://doi.org/10.1002/ange.202503054
Primary Topic
Fluorine in Organic Chemistry
Type
article
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article

Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for anti ‐ and syn ‐Selective Epoxidations of α , β ‐Unsaturated Aldehydes

Gerrit J. Poelarends, Hangyu Zhou, Guangcai Xu, Andreas Kunzendorf et al.
Angewandte Chemie
Fluorine in Organic Chemistry
article

Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for anti ‐ and syn ‐Selective Epoxidations of α , β ‐Unsaturated Aldehydes

Gerrit J. Poelarends, Hangyu Zhou, Guangcai Xu, Andreas Kunzendorf, A.M.W.H. Thunnissen, Hylke O. T. Frietema
article en

Abstract

Abstract The enzyme 2‐deoxy‐D‐ribose‐5‐phosphate aldolase (DERA) naturally catalyzes the reversible aldol addition between acetaldehyde and D‐glyceraldehyde‐3‐phosphate to yield 2‐deoxy‐D‐ribose‐5‐phosphate. Herein we describe the redesign of DERA into a proficient non‐natural peroxygenase that promotes the asymmetric epoxidation of various α , β ‐unsaturated aldehydes. This repurposed aldolase, named DERA‐EP, is able to utilize H 2 O 2 to accomplish both anti ‐ and syn ‐selective epoxidations of various α , β ‐unsaturated aldehydes to give the corresponding epoxides with moderate to high diastereoselectivity (diastereomeric ratio up to 99 : 1) and excellent enantioselectivity (enantiomeric ratio up to 99 : 1). Crystallographic analysis of DERA‐EP in a substrate‐free and substrate‐bound state provides a structural context for the evolved activity, a clear explanation for the high enantioselectivity, and compelling evidence for catalysis via enzyme‐bound iminium ion intermediates. The unprecedented anti ‐selectivity of DERA‐EP with multiple α , β ‐unsaturated aldehydes is complementary to the syn ‐selectivity of previously reported enzyme‐, metal‐ and organo‐catalysts, making DERA‐EP an attractive new asset to the toolbox of epoxidation catalysts.

Angewandte ChemieVol. 137(20)
University of Groningen (NL)
Openalex Percentile: Top 97%
Fluorine in Organic Chemistry
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Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for <i>anti</i> ‐ and <i>syn</i> ‐Selective Epoxidations of <i>α</i> , <i>β</i> ‐Unsaturated Aldehydes — Gerrit J. Poelarends, Hangyu Zhou, et al. · Angewandte Chemie (2025) | TGRS Research Map | TGRS