The Role of Chloroplast DNA Markers (psbA) in Maintaining the Position of Lemnoideae

The duckweed plant group belongs to the botanical family Araceae and has the potential as a food source. It is difficult to classify and the plants were originally grouped as the Lemnaceae family. However, current molecular taxonomy studies revealed the integration of Lemnaceae into the Araceae family, thus becoming the Lemnoideae subfamily. It is necessary to strengthen the position of Lemnoideae in Araceae using molecular marker psbA from chloroplast DNA This study aimed to determine the role of the psbA chloroplast DNA marker in regulating the position of Lemnoideae. A total of 41 sequences of the psbA gene taken from the species from seven subfamilies in Araceae and one outgroup were collected from the NCBI GenBank and then arranged in FASTA format. Sequence data was then aligned by ClustalX, and phylogenetic trees were reconstructed using PAUP and MEGA. From the resulting phylogenetic trees, it can be conferred that the Lemnoideae subfamily does not form a monophyletic group. Thereby, this in silico study using psbA markers concludes the position ofthe Lemnoideae subfamily in the family Araceae and we recommend not separating the plant group from the family Araceae.

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Publication Details

Journal
Journal of Biota
Published
2025-02-28
DOI
https://doi.org/10.24002/biota.v10i1.8906
Primary Topic
Plant and Fungal Species Descriptions
Type
article
Field-Weighted Citation Impact
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article

The Role of Chloroplast DNA Markers (psbA) in Maintaining the Position of Lemnoideae

Topik Hidayat, Zaki Fahreza Sururi, Azmah Nururrahmani, Maria Engzelita Sihombing
Journal of Biota
Plant and Fungal Species Descriptions
article

The Role of Chloroplast DNA Markers (psbA) in Maintaining the Position of Lemnoideae

Topik Hidayat, Zaki Fahreza Sururi, Azmah Nururrahmani, Maria Engzelita Sihombing
article en

Abstract

The duckweed plant group belongs to the botanical family Araceae and has the potential as a food source. It is difficult to classify and the plants were originally grouped as the Lemnaceae family. However, current molecular taxonomy studies revealed the integration of Lemnaceae into the Araceae family, thus becoming the Lemnoideae subfamily. It is necessary to strengthen the position of Lemnoideae in Araceae using molecular marker psbA from chloroplast DNA This study aimed to determine the role of the psbA chloroplast DNA marker in regulating the position of Lemnoideae. A total of 41 sequences of the psbA gene taken from the species from seven subfamilies in Araceae and one outgroup were collected from the NCBI GenBank and then arranged in FASTA format. Sequence data was then aligned by ClustalX, and phylogenetic trees were reconstructed using PAUP and MEGA. From the resulting phylogenetic trees, it can be conferred that the Lemnoideae subfamily does not form a monophyletic group. Thereby, this in silico study using psbA markers concludes the position ofthe Lemnoideae subfamily in the family Araceae and we recommend not separating the plant group from the family Araceae.

Journal of Biota
Indonesia University of Education (ID)
Openalex Percentile: Top 97%
Plant and Fungal Species Descriptions
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