217 closed Salmonella reference genomes using PacBio sequencing

High-quality complete reference genomes generated from PacBio long reads can provide essential details that are not available in draft genomes from short reads. A complete reference genome allows for more accurate data analysis and researchers to establish connections between genome variations and known genes, regulatory elements, and other genomic features. The addition of 217 complete genomes from 78 different Salmonella serovars, each representing either a distinct SNP cluster within the NCBI PD database or a unique strain, significantly enriches the diversity of the reference genome database.

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Publication Details

Journal
BMC Genomic Data
Published
2025-02-28
DOI
https://doi.org/10.1186/s12863-025-01304-7
Citations
3
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
2.42
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article

217 closed Salmonella reference genomes using PacBio sequencing

Maria Balkey, Yan Luo, Maria Hoffmann, Jae Hee Jang
3 citations
BMC Genomic Data
Genomics and Phylogenetic Studies
2.42
article

217 closed Salmonella reference genomes using PacBio sequencing

Maria Balkey, Yan Luo, Maria Hoffmann, Jae Hee Jang
article en
3 citations

Abstract

High-quality complete reference genomes generated from PacBio long reads can provide essential details that are not available in draft genomes from short reads. A complete reference genome allows for more accurate data analysis and researchers to establish connections between genome variations and known genes, regulatory elements, and other genomic features. The addition of 217 complete genomes from 78 different Salmonella serovars, each representing either a distinct SNP cluster within the NCBI PD database or a unique strain, significantly enriches the diversity of the reference genome database.

BMC Genomic DataVol. 26(1)
United States Food and Drug Administration (US), United States Department of Agriculture (US)
Zero hunger
Openalex Percentile: Top 13%
Genomics and Phylogenetic Studies
2.42
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