Simple DNA extraction for museum beetle specimens to unlock genetic data from historical collections

Museum beetle specimens are valuable resources for genetic analyses; however, obtaining DNA from aged specimens remains challenging due to degradation, desiccation, and contamination. In this study, we present a simple, low-cost protocol for extracting DNA from museum beetles, optimized using cetyltrimethylammonium bromide (CTAB). This method effectively addresses common issues such as DNA fragmentation and contamination, enabling the recovery of DNA suitable for downstream applications such as PCR and next-generation sequencing. It provides a reproducible, non-destructive approach to extracting genetic material from fragile beetle specimens, thereby facilitating molecular investigations in fields such as taxonomy and conservation biology. The protocol is summarized as follows:•A method for DNA extraction is optimized for museum beetle specimens preserved for over 45 years.•The protocol is non-destructive and compatible with PCR and next-generation sequencing.•Multiple extractions can be pooled to increase yields, particularly when DNA concentrations are low. This method broadens the possibilities for genetic analysis of historical specimens, offering new insights into long-term ecological and evolutionary processes.

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Publication Details

Journal
MethodsX
Published
2025-02-28
DOI
https://doi.org/10.1016/j.mex.2025.103236
Primary Topic
Environmental DNA in Biodiversity Studies
Type
article
Field-Weighted Citation Impact
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article

Simple DNA extraction for museum beetle specimens to unlock genetic data from historical collections

S PALANISAMY, Amr A. Mohamed, R. Balaji, Hathal M. Al Dhafer et al.
MethodsX
Environmental DNA in Biodiversity Studies
article

Simple DNA extraction for museum beetle specimens to unlock genetic data from historical collections

S PALANISAMY, Amr A. Mohamed, R. Balaji, Hathal M. Al Dhafer, Mahmoud S. Abdel-Dayem, Iftekhar Rasool
article en

Abstract

Museum beetle specimens are valuable resources for genetic analyses; however, obtaining DNA from aged specimens remains challenging due to degradation, desiccation, and contamination. In this study, we present a simple, low-cost protocol for extracting DNA from museum beetles, optimized using cetyltrimethylammonium bromide (CTAB). This method effectively addresses common issues such as DNA fragmentation and contamination, enabling the recovery of DNA suitable for downstream applications such as PCR and next-generation sequencing. It provides a reproducible, non-destructive approach to extracting genetic material from fragile beetle specimens, thereby facilitating molecular investigations in fields such as taxonomy and conservation biology. The protocol is summarized as follows:•A method for DNA extraction is optimized for museum beetle specimens preserved for over 45 years.•The protocol is non-destructive and compatible with PCR and next-generation sequencing.•Multiple extractions can be pooled to increase yields, particularly when DNA concentrations are low. This method broadens the possibilities for genetic analysis of historical specimens, offering new insights into long-term ecological and evolutionary processes.

MethodsXVol. 14
SRM Institute of Science and Technology (IN), Cairo University (EG), King Saud University (SA), Saveetha University (IN)
Openalex Percentile: Top 97%
Environmental DNA in Biodiversity Studies
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