When Heterophily Meets Heterogeneous Graphs: Latent Graphs Guided Unsupervised Representation Learning

Unsupervised heterogeneous graph representation learning (UHGRL) has gained increasing attention due to its significance in handling practical graphs without labels. However, heterophily has been largely ignored, despite its ubiquitous presence in real-world heterogeneous graphs. In this article, we define semantic heterophily and propose an innovative framework called latent graphs guided unsupervised representation learning (LatGRL) to handle this problem. First, we develop a similarity mining method that couples global structures and attributes, enabling the construction of fine-grained homophilic and heterophilic latent graphs (LGs) to guide the representation learning. Moreover, we propose an adaptive dual-frequency semantic fusion mechanism to address the problem of node-level semantic heterophily. To cope with the massive scale of real-world data, we further design a scalable implementation. Extensive experiments on benchmark datasets validate the effectiveness and efficiency of our proposed framework. The source code and datasets have been made available at https://github.com/zxlearningdeep/LatGRL.

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Publication Details

Journal
IEEE Transactions on Neural Networks and Learning Systems
Published
2025-02-26
DOI
https://doi.org/10.1109/tnnls.2025.3540063
Citations
23
Primary Topic
Advanced Graph Neural Networks
Type
article
Field-Weighted Citation Impact
57.06

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article

When Heterophily Meets Heterogeneous Graphs: Latent Graphs Guided Unsupervised Representation Learning

Zhao Kang, Zhixiang Shen
23 citations
IEEE Transactions on Neural Networks and Learning Systems
Advanced Graph Neural Networks
57.06
article

When Heterophily Meets Heterogeneous Graphs: Latent Graphs Guided Unsupervised Representation Learning

Zhao Kang, Zhixiang Shen
article en
23 citations

Abstract

Unsupervised heterogeneous graph representation learning (UHGRL) has gained increasing attention due to its significance in handling practical graphs without labels. However, heterophily has been largely ignored, despite its ubiquitous presence in real-world heterogeneous graphs. In this article, we define semantic heterophily and propose an innovative framework called latent graphs guided unsupervised representation learning (LatGRL) to handle this problem. First, we develop a similarity mining method that couples global structures and attributes, enabling the construction of fine-grained homophilic and heterophilic latent graphs (LGs) to guide the representation learning. Moreover, we propose an adaptive dual-frequency semantic fusion mechanism to address the problem of node-level semantic heterophily. To cope with the massive scale of real-world data, we further design a scalable implementation. Extensive experiments on benchmark datasets validate the effectiveness and efficiency of our proposed framework. The source code and datasets have been made available at https://github.com/zxlearningdeep/LatGRL.

IEEE Transactions on Neural Networks and Learning SystemsVol. 36(6)
University of Electronic Science and Technology of China (CN)
National Natural Science Foundation of China
Reduced inequalities
Openalex Percentile: Top 0%
Advanced Graph Neural Networks
57.06
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When Heterophily Meets Heterogeneous Graphs: Latent Graphs Guided Unsupervised Representation Learning — Zhao Kang, Zhixiang Shen · IEEE Transactions on Neural Networks and Learning Systems (2025) | TGRS Research Map | TGRS