Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for <i>anti</i> ‐ and <i>syn</i> ‐Selective Epoxidations of <i>α</i> , <i>β</i> ‐Unsaturated Aldehydes

The enzyme 2-deoxy-D-ribose-5-phosphate aldolase (DERA) naturally catalyzes the reversible aldol addition between acetaldehyde and D-glyceraldehyde-3-phosphate to yield 2-deoxy-D-ribose-5-phosphate. Herein we describe the redesign of DERA into a proficient non-natural peroxygenase that promotes the asymmetric epoxidation of various α,β-unsaturated aldehydes. This repurposed aldolase, named DERA-EP, is able to utilize H<sub>2</sub>O<sub>2</sub> to accomplish both anti- and syn-selective epoxidations of various α,β-unsaturated aldehydes to give the corresponding epoxides with moderate to high diastereoselectivity (diastereomeric ratio up to 99 : 1) and excellent enantioselectivity (enantiomeric ratio up to 99 : 1). Crystallographic analysis of DERA-EP in a substrate-free and substrate-bound state provides a structural context for the evolved activity, a clear explanation for the high enantioselectivity, and compelling evidence for catalysis via enzyme-bound iminium ion intermediates. The unprecedented anti-selectivity of DERA-EP with multiple α,β-unsaturated aldehydes is complementary to the syn-selectivity of previously reported enzyme-, metal- and organo-catalysts, making DERA-EP an attractive new asset to the toolbox of epoxidation catalysts.

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Publication Details

Journal
Angewandte Chemie International Edition
Published
2025-03-02
DOI
https://doi.org/10.1002/anie.202503054
Citations
3
Primary Topic
Metal-Catalyzed Oxygenation Mechanisms
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article
Field-Weighted Citation Impact
1.61
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article

Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for anti ‐ and syn ‐Selective Epoxidations of α , β ‐Unsaturated Aldehydes

Gerrit J. Poelarends, Hangyu Zhou, Guangcai Xu, Andreas Kunzendorf et al.
3 citations
Angewandte Chemie International Edition
Metal-Catalyzed Oxygenation Mechanisms
1.61
article

Engineering 2‐Deoxy‐D‐ribose‐5‐phosphate Aldolase for anti ‐ and syn ‐Selective Epoxidations of α , β ‐Unsaturated Aldehydes

Gerrit J. Poelarends, Hangyu Zhou, Guangcai Xu, Andreas Kunzendorf, A.M.W.H. Thunnissen, Hylke O. T. Frietema
article en
3 citations

Abstract

The enzyme 2-deoxy-D-ribose-5-phosphate aldolase (DERA) naturally catalyzes the reversible aldol addition between acetaldehyde and D-glyceraldehyde-3-phosphate to yield 2-deoxy-D-ribose-5-phosphate. Herein we describe the redesign of DERA into a proficient non-natural peroxygenase that promotes the asymmetric epoxidation of various α,β-unsaturated aldehydes. This repurposed aldolase, named DERA-EP, is able to utilize H<sub>2</sub>O<sub>2</sub> to accomplish both anti- and syn-selective epoxidations of various α,β-unsaturated aldehydes to give the corresponding epoxides with moderate to high diastereoselectivity (diastereomeric ratio up to 99 : 1) and excellent enantioselectivity (enantiomeric ratio up to 99 : 1). Crystallographic analysis of DERA-EP in a substrate-free and substrate-bound state provides a structural context for the evolved activity, a clear explanation for the high enantioselectivity, and compelling evidence for catalysis via enzyme-bound iminium ion intermediates. The unprecedented anti-selectivity of DERA-EP with multiple α,β-unsaturated aldehydes is complementary to the syn-selectivity of previously reported enzyme-, metal- and organo-catalysts, making DERA-EP an attractive new asset to the toolbox of epoxidation catalysts.

Angewandte Chemie International EditionVol. 64(20)
University of Groningen (NL)
Clean water and sanitation
Openalex Percentile: Top 18%
Metal-Catalyzed Oxygenation Mechanisms
1.61
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