Assessing Completeness of Clinical Histories Accompanying Imaging Orders Using Adapted Open-Source and Closed-Source Large Language Models
Background Incomplete clinical histories are a well-known problem in radiology. Previous dedicated quality improvement efforts focusing on reproducible assessments of the completeness of free-text clinical histories have relied on tedious manual analysis. Purpose To adapt and evaluate open-source and closed-source large language models (LLMs) for their ability to automatically extract clinical history elements within imaging orders and to use the best-performing adapted open-source model to assess the completeness of a large sample of clinical histories as a benchmark for clinical practice. Materials and Methods This retrospective single-site study used previously extracted information accompanying CT, MRI, US, and radiography orders from August 2020 to May 2022 at an adult and pediatric emergency department of a 613-bed tertiary academic medical center. Two open-source (Llama 2-7B [Meta], Mistral-7B [Mistral AI]) and one closed-source (GPT-4 Turbo [OpenAI]) LLMs were adapted using prompt engineering, in-context learning, and fine-tuning (open-source only) to extract the elements "past medical history," "what," "when," "where," and "clinical concern" from clinical histories. Model performance, interreader agreement using Cohen κ (none to slight, 0.01-0.20; fair, 0.21-0.40; moderate, 0.41-0.60; substantial, 0.61-0.80; almost perfect, 0.81-1.00), and semantic similarity between the models and the adjudicated manual annotations of two board-certified radiologists with 16 and 3 years of postfellowship experience, respectively, were assessed using accuracy, Cohen κ, and BERTScore, an LLM metric that quantifies how well two pieces of text convey the same meaning; 95% CIs were also calculated. The best-performing open-source model was then used to assess completeness on a large dataset of unannotated clinical histories. Results A total of 50 186 clinical histories were included (794 training, 150 validation, 300 initial testing, 48 942 real-world application). Of the two open-source models, Mistral-7B outperformed Llama 2-7B in assessing completeness and was further fine-tuned. Both Mistral-7B and GPT-4 Turbo showed substantial overall agreement with radiologists (mean κ, 0.73 [95% CI: 0.67, 0.78] to 0.77 [95% CI: 0.71, 0.82]) and adjudicated annotations (mean BERTScore, 0.96 [95% CI: 0.96, 0.97] for both models; <i>P</i> = .38). Mistral-7B also rivaled GPT-4 Turbo in performance (weighted overall mean accuracy, 91% [95% CI: 89, 93] vs 92% [95% CI: 90, 94]; <i>P</i> = .31) despite being a smaller model. Using Mistral-7B, 26.2% (12 803 of 48 942) of unannotated clinical histories were found to contain all five elements. Conclusion An easily deployable fine-tuned open-source LLM (Mistral-7B), rivaling GPT-4 Turbo in performance, could effectively extract clinical history elements with substantial agreement with radiologists and produce a benchmark for completeness of a large sample of clinical histories. The model and code will be fully open-sourced. © RSNA, 2025 <i>Supplemental material is available for this article.</i>
Authors
- David B. Larson (ORCID: https://orcid.org/0000-0002-1157-5905)
- Magdalini Paschali (ORCID: https://orcid.org/0000-0003-4967-3137)
- Matthew Petterson (ORCID: https://orcid.org/0000-0003-3003-7835)
- Akshay Sanjay Chaudhari (ORCID: https://orcid.org/0000-0002-3667-6796)
- Dave Van Veen (ORCID: https://orcid.org/0000-0001-9312-1773)
- Arogya Koirala (ORCID: https://orcid.org/0009-0007-0304-5350)
- Lina Cheuy
- Zhongnan Fang (ORCID: https://orcid.org/0000-0003-3463-7766)
- Hye Sun Na
Institutions
- Stanford University (US)
Publication Details
- Journal
- Radiology
- Published
- 2025-02-01
- DOI
- https://doi.org/10.1148/radiol.241051
- Citations
- 11
- Primary Topic
- Radiology practices and education
- Type
- article
- Field-Weighted Citation Impact
- 14.96
Funders
- National Institutes of Health