Content-Based Histopathological Image Retrieval

Feature descriptors in histopathological images are an important challenge for the implementation of Content-Based Image Retrieval (CBIR) systems, an essential tool to support pathologists. Deep learning models like Convolutional Neural Networks and Vision Transformers improve the extraction of these feature descriptors. These models typically generate embeddings by leveraging deeper single-scale linear layers or advanced pooling layers. However, these embeddings, by focusing on local spatial details at a single scale, miss out on the richer spatial context from earlier layers. This gap suggests the development of methods that incorporate multi-scale information to enhance the depth and utility of feature descriptors in histopathological image analysis. In this work, we propose the Local-Global Feature Fusion Embedding Model. This proposal is composed of three elements: (1) a pre-trained backbone for feature extraction from multi-scales, (2) a neck branch for local-global feature fusion, and (3) a Generalized Mean (GeM)-based pooling head for feature descriptors. Based on our experiments, the model's neck and head were trained on ImageNet-1k and PanNuke datasets employing the Sub-center ArcFace loss and compared with the state-of-the-art Kimia Path24C dataset for histopathological image retrieval, achieving a Recall@1 of 99.40% for test patches.

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Publication Details

Journal
Sensors
Published
2025-02-22
DOI
https://doi.org/10.3390/s25051350
Citations
1
Primary Topic
AI in cancer detection
Type
article
Field-Weighted Citation Impact
2.48
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article

Content-Based Histopathological Image Retrieval

Camilo Núñez, Mauricio Solar, Humberto Farías
1 citations
Sensors
AI in cancer detection
2.48
article

Content-Based Histopathological Image Retrieval

Camilo Núñez, Mauricio Solar, Humberto Farías
article en
1 citations

Abstract

Feature descriptors in histopathological images are an important challenge for the implementation of Content-Based Image Retrieval (CBIR) systems, an essential tool to support pathologists. Deep learning models like Convolutional Neural Networks and Vision Transformers improve the extraction of these feature descriptors. These models typically generate embeddings by leveraging deeper single-scale linear layers or advanced pooling layers. However, these embeddings, by focusing on local spatial details at a single scale, miss out on the richer spatial context from earlier layers. This gap suggests the development of methods that incorporate multi-scale information to enhance the depth and utility of feature descriptors in histopathological image analysis. In this work, we propose the Local-Global Feature Fusion Embedding Model. This proposal is composed of three elements: (1) a pre-trained backbone for feature extraction from multi-scales, (2) a neck branch for local-global feature fusion, and (3) a Generalized Mean (GeM)-based pooling head for feature descriptors. Based on our experiments, the model's neck and head were trained on ImageNet-1k and PanNuke datasets employing the Sub-center ArcFace loss and compared with the state-of-the-art Kimia Path24C dataset for histopathological image retrieval, achieving a Recall@1 of 99.40% for test patches.

SensorsVol. 25(5)
University of La Serena (CL), Federico Santa María Technical University (CL)
Openalex Percentile: Top 12%
AI in cancer detection
2.48
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