Development of the autonomous lab system to support biotechnology research

In this study, we developed the autonomous lab (ANL), which is a system based on robotics and artificial intelligence (AI) to conduct biotechnology experiments and formulate scientific hypotheses. This system was designed with modular devices and Bayesian optimization algorithms, allowing it to effectively run a closed loop from culturing to preprocessing, measurement, analysis, and hypothesis formulation. As a case study, we used the ANL to optimize medium conditions for a recombinant Escherichia coli strain, which overproduces glutamic acid. The results demonstrated that our autonomous system successfully replicated the experimental techniques, such as sample preparation and data measurement, and improved both the cell growth rate and the maximum cell growth. The ANL offers a versatile and scalable solution for various applications in the field of bioproduction, with the potential to improve efficiency and reliability of experimental processes in the future.

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Publication Details

Journal
Scientific Reports
Published
2025-02-24
DOI
https://doi.org/10.1038/s41598-025-89069-y
Citations
10
Primary Topic
Viral Infectious Diseases and Gene Expression in Insects
Type
article
Field-Weighted Citation Impact
8.06

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article

Development of the autonomous lab system to support biotechnology research

Yusuke Nakai, T. Tomono, Ryota Hidese, Akiko Nishi et al.
10 citations
Scientific Reports
Viral Infectious Diseases and Gene Expression in Insects
8.06
article

Development of the autonomous lab system to support biotechnology research

Yusuke Nakai, T. Tomono, Ryota Hidese, Akiko Nishi, Yoh‐ichi Tagawa, Hisashi Yasueda, Ryō Suzuki, Tomohisa Hasunuma, Keiji Fushimi, Masahiro Ikegami, Risa Nimura
article en
10 citations

Abstract

In this study, we developed the autonomous lab (ANL), which is a system based on robotics and artificial intelligence (AI) to conduct biotechnology experiments and formulate scientific hypotheses. This system was designed with modular devices and Bayesian optimization algorithms, allowing it to effectively run a closed loop from culturing to preprocessing, measurement, analysis, and hypothesis formulation. As a case study, we used the ANL to optimize medium conditions for a recombinant Escherichia coli strain, which overproduces glutamic acid. The results demonstrated that our autonomous system successfully replicated the experimental techniques, such as sample preparation and data measurement, and improved both the cell growth rate and the maximum cell growth. The ANL offers a versatile and scalable solution for various applications in the field of bioproduction, with the potential to improve efficiency and reliability of experimental processes in the future.

Scientific ReportsVol. 15(1)
University of Tsukuba (JP), Kobe University (JP), Shimadzu (Japan) (JP)
Shimadzu, Japan Society for the Promotion of Science
Industry, innovation and infrastructure
Openalex Percentile: Top 2%
Viral Infectious Diseases and Gene Expression in Insects
8.06
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Development of the autonomous lab system to support biotechnology research — Yusuke Nakai, T. Tomono, et al. · Scientific Reports (2025) | TGRS Research Map | TGRS