Paracoccus broussonetiae subsp. drimophilus subsp. nov., a Novel Subspecies Salt-Tolerant Endophytic Bacterium from Maize Root in Hunan

In an investigation exploring endophytic microbiota from agricultural crops, an aerobic, non-motile, Gram-negative, coccobacillus-shaped bacterial isolate, designated as strain NGMCC 1.201697<sup>T</sup>, was isolated from maize roots in Hunan Province, China. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain NGMCC 1.201697<sup>T</sup> belonged to the genus <i>Paracoccus</i>, showing the highest sequence similarity to <i>Paracoccus broussonetiae</i> CPCC 101403<sup>T</sup> (99.86%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) were 98.57% and 87.90% between the novel isolate and its closest phylogenetic relative. However, phenotypic characterization further differentiated the isolate from <i>P. broussonetiae</i> CPCC 101403<sup>T</sup>. The isolate showed enhanced environmental tolerance adaptability (growth in 0-8% NaCl and 4-37 °C), unique enzymatic activities (esterase C4, β-glucosidase, L-proline arylamidase, and β-galactosidase), and expanded metabolic capabilities (D-mannitol, D-cellobiose, saccharose, and so on). The major polar lipids consisted of diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylcholine (PC), phosphatidylglycerol (PG), two unidentified glycolipids (GLs) and four unidentified phospholipids (PLs). The predominant respiratory quinone was ubiquinone-10, and the major fatty acid was summed feature 8 (C18:1 ω7c, 69.42%). The DNA G + C content was 64.49 mol%. Based on results of these analyses, strain NGMCC 1.201697<sup>T</sup> represents a novel subspecies of <i>Paracoccus broussonetiae</i>, for which the name <i>Paracoccus broussonetiae</i> subsp. drimophilus subsp. nov. is proposed. The type-strain is NGMCC 1.201697<sup>T</sup> (=CGMCC 1.61958<sup>T</sup> =JCM 37104<sup>T</sup>).

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Journal
Life
Published
2025-02-24
DOI
https://doi.org/10.3390/life15030354
Citations
3
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
2.42

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article

Paracoccus broussonetiae subsp. drimophilus subsp. nov., a Novel Subspecies Salt-Tolerant Endophytic Bacterium from Maize Root in Hunan

Chi Zhou, Qingzhuang Zhang, Ming Li, Xue Li et al.
3 citations
Life
Genomics and Phylogenetic Studies
2.42
article

Paracoccus broussonetiae subsp. drimophilus subsp. nov., a Novel Subspecies Salt-Tolerant Endophytic Bacterium from Maize Root in Hunan

Chi Zhou, Qingzhuang Zhang, Ming Li, Xue Li, Lei Su
article en
3 citations

Abstract

In an investigation exploring endophytic microbiota from agricultural crops, an aerobic, non-motile, Gram-negative, coccobacillus-shaped bacterial isolate, designated as strain NGMCC 1.201697<sup>T</sup>, was isolated from maize roots in Hunan Province, China. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain NGMCC 1.201697<sup>T</sup> belonged to the genus <i>Paracoccus</i>, showing the highest sequence similarity to <i>Paracoccus broussonetiae</i> CPCC 101403<sup>T</sup> (99.86%). The average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) were 98.57% and 87.90% between the novel isolate and its closest phylogenetic relative. However, phenotypic characterization further differentiated the isolate from <i>P. broussonetiae</i> CPCC 101403<sup>T</sup>. The isolate showed enhanced environmental tolerance adaptability (growth in 0-8% NaCl and 4-37 °C), unique enzymatic activities (esterase C4, β-glucosidase, L-proline arylamidase, and β-galactosidase), and expanded metabolic capabilities (D-mannitol, D-cellobiose, saccharose, and so on). The major polar lipids consisted of diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylcholine (PC), phosphatidylglycerol (PG), two unidentified glycolipids (GLs) and four unidentified phospholipids (PLs). The predominant respiratory quinone was ubiquinone-10, and the major fatty acid was summed feature 8 (C18:1 ω7c, 69.42%). The DNA G + C content was 64.49 mol%. Based on results of these analyses, strain NGMCC 1.201697<sup>T</sup> represents a novel subspecies of <i>Paracoccus broussonetiae</i>, for which the name <i>Paracoccus broussonetiae</i> subsp. drimophilus subsp. nov. is proposed. The type-strain is NGMCC 1.201697<sup>T</sup> (=CGMCC 1.61958<sup>T</sup> =JCM 37104<sup>T</sup>).

LifeVol. 15(3)
Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Institute of Laboratory Animal Science (CN), Chinese Academy of Agricultural Sciences (CN), Institute of Animal Sciences (CN), Hunan Institute of Microbiology (CN), Hunan Agricultural University (CN)
National Key Research and Development Program of China
Openalex Percentile: Top 13%
Genomics and Phylogenetic Studies
2.42
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